Burkholderia seminalis: WJ12_00130
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Entry
WJ12_00130 CDS
T04851
Name
(GenBank) sugar-binding protein
Organism
bsem
Burkholderia seminalis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
Beta-prop_EML_2
Motif
Other DBs
NCBI-ProteinID:
AOJ23368
LinkDB
All DBs
Position
1:complement(31855..36576)
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AA seq
1573 aa
AA seq
DB search
MTASSGVILPKPTEVYVAPLLQIETIDVKAGVKACDRWLRAISHDFITIERLEMVANALP
VVANIMAAVDLVLDIKDMIEHGQSGKHPDVFDYLNLGLDLIGIIPIPPGTAEFRMGVRPV
MKLVRQKVVESGKALGEATLQVMQTALLQALIDSLSEQFAGRIQSFVDGVKKELDNLLKT
CADYIEKFMIGFARLFEEVAGEKQLSVAHNVRAVGQHAGQVASGFAAHDARKTFAGLGHL
IVDFVKIEAKELINTGTQAAKVLDLKYREPLLNVAKALRTMIPVVKEKILALGGIDAGKI
GWLINLIQTAIDKKRDALRKQKVHSTGIKEQGTTKVHRHEGEGQKETVRHTEPAQHPGPN
DSKLICPRPSPPVATKRSVGFALGDERLEHHDFTLPGVLPITWTRTYRSFFDANDSGGEL
GARWITAYTTRIDAHRDRFTYHDATGRSIDYPPLAPGDAHVDRSEGVTLLRLDDTWITLT
RGHELLEAYEFRGDAFRLAFVKDQSGNQVTLDYDDRHRLTRLITPTAIVAFHYDEKGRIV
EATHHDADGKRIDTLARYMYDTDGDLIVAIDRNGGRREYVYRHHLITRYTDRTDRAMNLE
WDGTGPKSKCVREYADDGSFDTRLAWHPDFRMVSVTDALGNVTKHYYDLHGYTFRIVHPD
GREEWMYRDAYHNLVQHTYPDGGVERMSYNEHDNLVRHVRVDGSVTEMDYDDKDHMVRIV
DPQGAVWLREYDDAGRVTVETDPLGHKTTYSYNAQGLPVEVTDAKGGVKVMAYDDAGRLI
SHTDCSGKTTTWAYDVQGRLTEETDASGGVIAYRYGSNGRLEAIRTAAGTRRVQYDAEGR
LLAITDPMERTSRYSYDVAGRVAVRTDALGNTLSYGYDRLGRLVRLTDSNHATYQCMYDP
VGRLLETVGFDGTETRYVYSEDTGYVSAIDVAGKITHVEFDRGGRLVRRTCDGNEERFAY
DALGRLVDAQNACSRIQHFFDPAGNLVREHHAYDLFGEQRSYVWHHTYDQLGTRIGTVRP
DGHRIDWLTYGSGHVHGMLLDNEARVNFERDDLYREVQRTYASKLEQRTEYDPAGRLLNW
TLHREKAPAPLMARHYRYDAASQITHIEDSRRGLFDYRYDPVGRLIEATGHGSAERFAFD
PAGNLVDAGSPEHARTSAPPSPVRSVSTLPPAVPKVLGNLLREYAGSRFSYDPQGNVTEK
RTPESVQRFEWDAFNRLVRARIESPARQTDARYFYDAAGRRIAKEVDGIATIFGWDGNRL
AYESDRERSTHYVYEANSFVPLAQYVSVPVGGIPTPTRDGSARYASEDDPLQRIPVSEAD
AHLYYYHCDQVGTPLMLTDELGEVVWEATYKAWGEAKEIVSRVSRASGHAVRNAIRFQGQ
QLDDETGLAYNRHRYYDAATARYVSADPIGLLGGVNQYRYVLAPTGWVDPLGLSEDPCCN
CGGKAIIRHYDTDSATGHYTVEVESGYMSVHTHQVTDNAAGTTKIVNERRERYMTGDPIL
HTAEVPLPDAKAAMAYQQSQIGKTLGEYDERTNSCVDHVANVLRAGGADVPKGPLGQMRY
LGKLGFKAKVKKE
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcttcttcgggcgtcattcttcccaagccgaccgaggtctacgtcgcgccgttg
ctgcagatcgagaccatcgatgtaaaggctggcgtcaaggcctgtgaccgatggttgcgt
gccatcagccacgacttcatcaccatcgagcggctcgagatggttgccaacgcgctgccg
gtggtggcgaatatcatggcagccgtcgatctcgtgctcgatatcaaggacatgatcgag
catgggcagagtggcaagcatcccgatgtgttcgattatctgaacctcggtctggacctg
atcggcatcatcccgattccgcccggtactgccgaattccggatgggtgtgcgtccggtg
atgaagctcgtgcggcagaaggtcgtcgaaagcggcaaggcactcggtgaagcgacattg
caggtcatgcagaccgcactgctgcaggcactgatcgatagtctgagcgagcagttcgcc
ggccgtattcagagtttcgtcgatggcgtgaagaaggagctggacaacctgctcaagacc
tgcgccgattacatcgagaaattcatgatcggcttcgcgcgcctgttcgaggaggtggcg
ggcgagaagcaattgagtgtcgcgcacaatgtgcgggcggttgggcagcatgcgggccag
gttgcatctggcttcgcggcgcatgatgcacgcaagacgtttgcggggctcggtcatttg
atcgtcgactttgtgaagatcgaagcaaaggagctcatcaacaccgggacgcaggcggcg
aaagtgctcgatctcaagtatcgcgagccgttgctgaacgttgcgaaggcgttgcgcacc
atgatcccggtggtcaaggagaaaatcctcgcgctgggcggtatcgacgccggcaagatc
ggctggttgatcaaccttatccagactgccatcgacaagaagcgcgatgcgttgcgtaag
cagaaagtgcattcgactggcatcaaggaacagggcacgacgaaagttcatcgtcatgaa
ggtgaggggcagaaggagacggtcaggcatacggaaccggcccaacatccggggccgaac
gacagcaagctgatctgtccgcgaccttcgccgccggttgcgacgaagcgttcggtggga
tttgcgctgggcgacgagcgactcgagcaccacgatttcacgttgcccggtgttcttccc
attacctggacacggacttatcgatcgtttttcgacgcgaatgattcgggcggagagctt
ggtgcacgctggattacggcatacaccacgcgtatcgatgcgcatcgggatcgatttacg
taccacgacgcgacaggccgcagcatcgactatccaccgcttgcgcctggcgacgcccat
gttgaccggagcgagggcgtgacgttgttgcgcctcgacgacacgtggatcacgttgacg
cggggacatgaactgcttgaggcctatgaatttcgcggcgacgcatttcgtctcgccttc
gtcaaggaccagtcgggcaaccaggtcacgctcgactacgacgatcgtcatcgactgacg
cggttgattacgccgactgcgatcgttgccttccattacgacgaaaaagggcggatcgtc
gaggcaacccatcatgatgccgatggcaagcgtatcgatacgctggcacgttatatgtat
gacacggacggcgatctcatcgtggcgatcgaccggaatggaggtcgtcgcgaatacgtg
taccgtcaccacctcattacacgctatacggatcgaaccgaccgtgcgatgaacctagag
tgggacggtacggggccgaaatcgaaatgtgttcgcgagtatgcggatgacggcagcttc
gacacgcgacttgcatggcatcccgacttccgcatggtcagcgtgacggacgcgctcggc
aacgtaacgaagcattattacgatctgcatggctacacgttccgcatcgtccatccggat
ggtcgagaggaatggatgtatcgggatgcttatcataatctcgtacagcatacctatccg
gacggtggcgtggaacgcatgtcctataacgaacacgacaaccttgtccggcatgttcgt
gtagacggaagcgtgaccgagatggactacgacgacaaggaccatatggttcgaatcgtc
gatccccagggtgccgtgtggttgcgtgaatatgacgacgcggggcgcgtcaccgtcgaa
accgatccgctcggacacaagacgacatatagctacaacgcacaaggcttgccggtagag
gtgaccgatgccaagggtggcgtcaaggtcatggcgtatgacgacgcgggccggttgatc
tcacatacggactgctcgggcaagacgacgacctgggcctatgacgtgcagggtcgattg
accgaagagacggatgcgtcaggcggggtaatcgcgtatcgatatggcagcaatgggcgg
ctcgaagcaattcgcacggcagccggtactcgacgtgttcaatacgacgccgaaggacgc
ctgcttgcgatcacggacccgatggagcgtacatcgcgctacagctatgacgttgcgggg
cgcgtcgcggtgcgcaccgatgcgctggggaacacgctgagttacggctacgacaggctc
gggcgtctggtgagattgaccgactcgaatcatgcgacctatcagtgcatgtacgatccc
gttggccggctgctcgagaccgtcggcttcgacggtacggaaacgcgctatgtctacagt
gaagacaccggctatgtatctgccatcgatgtagccgggaagatcacccacgtcgaattc
gatcgcggaggccggctggtacgacggacgtgcgatggtaacgaagagcggttcgcctac
gatgcgctcggtcgactcgtcgacgcgcaaaatgcctgcagtcgcatccagcatttcttc
gatcccgcgggaaacctggtgcgggagcatcacgcatatgatcttttcggcgaacagcgc
agttacgtctggcatcacacgtacgaccaattgggcacgcgtatcggtacggtgcggccg
gatggacacaggatcgactggctcacgtatggatcagggcacgtccacgggatgttgctc
gacaacgaagcgcgcgtgaattttgaacgtgatgatttatatcgcgaagttcaacgaacc
tacgcgagcaagctcgaacagcggaccgaatatgacccggccggccgcttgctgaactgg
acgctccatcgcgagaaggcccccgcgccgttgatggcccggcattatcgctacgacgcc
gcgagccagatcacccatattgaggacagccggcgaggattgttcgactatcgatacgat
ccggtcgggcggttgatcgaagcgaccgggcacggcagtgccgagcgttttgccttcgac
cctgccggcaaccttgtcgatgccggcagcccggaacatgcgcgcacgtcagcgccgccg
agcccggttcgatcggtcagcacgctgcctcctgcggtgccgaaagtgctcggcaacctg
ctgagggaatatgccggttcgcgcttcagttacgacccgcaagggaatgtcaccgagaaa
cgaacgccggaaagcgtgcaacgctttgaatgggatgcgttcaatcgattggttcgtgca
cgaatcgaatcgccggcgcgccagaccgatgcgcggtatttctacgatgccgcgggcaga
cgaatcgcgaaggaggtcgacgggatcgcgacgatattcggctgggacggcaaccggctc
gcttatgagagcgatcgcgagcgcagtacgcactatgtgtacgaagcgaattcctttgtg
ccgcttgcacaatacgtcagcgtacctgtcggtggaatcccgactccgacgcgtgatggt
tcggcacgttatgcgtccgaagacgatccattgcagcggattccggtctcggaggcggac
gctcacctgtattactaccactgcgatcaagtcggcacgccattgatgctgaccgacgaa
ctcggtgaggttgtgtgggaggcgacttacaaggcgtggggtgaagcgaaggaaattgtt
tcacgcgtctcgcgcgcatccgggcacgcggtgcggaacgcgattcgttttcaggggcag
caactggatgacgagaccgggctcgcctataaccgtcaccgctactacgacgccgcgacg
gcacgctatgtcagtgccgatcccattggcttgttggggggcgtcaatcaatatcgctat
gtgttggcgccgaccgggtgggtcgatccgctggggctgagcgaagatccttgttgcaac
tgcggcggcaaggcgattatccggcactacgacaccgattcggcgaccgggcattacacc
gtagaggtggagagcggctatatgtcggttcacacgcatcaggtgacggacaatgcggcc
ggaaccaccaagatcgtgaacgagaggcgtgagcgctatatgaccggtgacccgattctg
cataccgccgaggttccgttgcctgacgcaaaggcagccatggcctatcagcagtctcag
atcggaaagacgcttggcgagtatgacgagcgtacgaacagttgtgtcgaccatgtcgcg
aatgtgcttcgagccgggggagcggatgttccgaaggggcccttgggtcagatgagatat
ctcggaaagctgggtttcaaggcaaaggtaaagaaggaatga
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