Burkholderia seminalis: WJ12_02680
Help
Entry
WJ12_02680 CDS
T04851
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bsem
Burkholderia seminalis
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsem03016
]
WJ12_02680
Enzymes [BR:
bsem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
WJ12_02680
Transfer RNA biogenesis [BR:
bsem03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
WJ12_02680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AOJ23819
LinkDB
All DBs
Position
1:594651..596738
Genome browser
AA seq
695 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFEKPAASELMQEADTA
AQQIDLDFLWECAPADEFAYTALAAEYFGAAYGPVERAALVLRLHGSPVYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQAQYEEELKAGKLPDAFAGKVLGLLTRPDKNAIEYKA
MEAAAGARGVSPARLMLDCGGIASPRALHEARFLAEFFPHGTGFPPVAVGPLPDDLPRAN
VEAFSIDDITTTEIDDAFSVEHLSDGRVRIGVHIAAPALGIVRGDAVDAIARTRLSTVYM
PGDKITMLPDDVVDVFTLKEGDYRPALSLYIIVNRETQEIVANETRAELVFVKNNLRHNT
LDELVTEETLAAGTGDYPHKDDIAVLWPLAQALFEKRQVARAGYGLKREVQRNTDYNFYV
EGEHVSITPRRRGSPLDLIVSELAILANSTWGAFLHDHTVPGIYRSQRGFGAPGPKRTRM
QTTAAPHEGLGVAQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLYAV
VQGFDDTYTAYADYQRRMEYFWCLRWLAQEQKKQVVASVVKGDLVRLEDIPLLLHVPGLG
VHARGTRVLLDVMSLDELTIEASVRLLNVLDVPTVTSGDAADEEDDAEGGDDTLVDAEDA
SAETEAEALAEADGAASEAGGEAANGNDGEEGRAS
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgatgcatttcaggtcgagttgcccggcgggcggcgcgcgaaggtccgcgcgaaagac
gtgctgatcgaattcgagaagccggccgcgagcgagctgatgcaggaggccgacacggcc
gcgcagcagatcgacctggatttcctgtgggaatgcgcgccggccgacgagtttgcgtat
acggcgctggccgccgagtatttcggcgcggcctacggcccggtcgagcgcgcggcgctg
gtgctgcggctgcatggctcgcccgtctacttccgccgcaaggggcgcggccagtatcag
cgcgcgccggaagagcagctcaagatggcgctcgcgtcgctcgagcgcaagcgccagcag
gcgctggtccaggcgcagtacgaagaggaactgaaggccggcaagctgccggacgcgttc
gcgggcaaggtgctcgggctgctgacgcggccggacaagaacgcgatcgaatacaaggcg
atggaagcggcggccggcgcgcgcggcgtgtcgccggcgcggctgatgctcgactgcggc
ggcatcgcgtcgccgcgtgcgctgcacgaggcgcgcttcctcgcggaattcttcccgcac
ggcacgggctttccgcccgtcgcggtcggcccgctgccggacgatctgccgcgcgcgaac
gtcgaggcattttcgatcgacgacatcacgacgaccgagatcgacgatgcgttctcggtc
gagcacctgtccgacggccgcgtgcggatcggcgtgcacatcgcggcgccggcgctcggc
atcgtgcgcggcgacgcggtcgatgcgatcgcgcgcacgcgcctgtcgaccgtctacatg
ccgggcgacaagatcacgatgctgccggacgacgtcgtcgacgtgttcacgctgaaggag
ggcgattaccgtccggcgctgtcgctgtacatcatcgtcaaccgcgaaacgcaggagatc
gtcgcgaacgagacgcgcgccgagctcgtgttcgtgaagaacaacctgcgccacaacacg
ctcgacgagctcgtcaccgaagagacgctcgcggccggcaccggcgactatccgcacaag
gacgacatcgccgtgctgtggccgctcgcgcaggcgctgttcgagaagcgccaggtcgcc
cgcgcgggctacggcctgaagcgcgaggtgcagcgcaacaccgactacaacttctacgtc
gaaggcgagcacgtgtcgatcacgccgcgtcgccgcgggtcgccgctcgacctgatcgtg
tcggagctcgcgatcctcgcgaactcgacctggggcgcgttcctgcacgaccacacggtg
ccgggcatctatcgctcgcagcgcggcttcggcgcgccgggcccgaagcgcacgcgaatg
cagacgacggccgcgccgcacgaaggcctcggcgtggcccagtacgcatggagcacgtcg
ccgctgcgccgctacgtcgacctcgtgaaccagtggcagctgctcgcgtgcgtgcagcat
ggcgtcaccgcgaagctcgccgcgccgttcaagccgaaggacgccgacctgtacgcggtc
gtgcagggtttcgacgatacctatacggcctatgccgattaccagcgccgcatggagtac
ttctggtgcttgcgctggctcgcgcaggagcagaagaagcaggtggtcgcgagcgtcgtg
aagggtgatctcgtgcgcctggaggacattccgctgctgctgcatgtgccggggctcggc
gtgcatgcgcgcggcacgcgcgtgctgctcgacgtgatgtcgctcgacgagctgacgatc
gaggcgtcggtgcgcctgctgaacgtgctcgacgtgccgaccgtgacgagcggcgacgcg
gccgacgaagaggatgacgccgaaggcggcgacgacacgctggtcgacgcggaagacgcg
tctgcggaaaccgaagccgaagcgctggccgaagcggacggcgcggcatcggaggcgggc
ggcgaagccgcgaacggcaacgacggcgaagaagggcgcgcatcatga
DBGET
integrated database retrieval system
