Burkholderia seminalis: WJ12_04635
Help
Entry
WJ12_04635 CDS
T04851
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bsem
Burkholderia seminalis
Pathway
bsem03030
DNA replication
bsem03430
Mismatch repair
bsem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WJ12_04635
03430 Mismatch repair
WJ12_04635
03440 Homologous recombination
WJ12_04635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsem03032
]
WJ12_04635
03400 DNA repair and recombination proteins [BR:
bsem03400
]
WJ12_04635
Enzymes [BR:
bsem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WJ12_04635
DNA replication proteins [BR:
bsem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WJ12_04635
DNA repair and recombination proteins [BR:
bsem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WJ12_04635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AOJ24174
LinkDB
All DBs
Position
1:1028482..1029609
Genome browser
AA seq
375 aa
AA seq
DB search
MSDSRPSDPASEQPLVFVDLETTGGSPAEHRITEIGVVEIGPLGVSTWTSLVNPEQAIPP
FIQQLTGISDAMVRDAPSFASLAPALFERLDGKLFVAHNASFDRGFLRAEFERAGLAFNP
DVLCTVRLSRALFPRESRHGLDALIERHGLVPAARHRALADADLLWQFWRQLHDIVPLER
LRDQIARTTRHFRLGGDLTEAWLDTAPAGCGAYALFGEGDAPLYVGRSVRVRQRLRALLT
GERRSSKEMRLAQQVRRVEWRETGNELGAMLAEAQWIAQLRPSYNRRPAADGVRGGNAHW
PFDGAVAFEANGERRLLHVIDGWRYLGTAESLDAAARLAAEAADGTFEPFTHRLLQTHLA
RGLQLIPLAALTPAG
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattctcgtccgtccgatcccgccagcgaacaaccgctcgtcttcgtcgacctc
gaaaccaccggcggctcgcccgccgagcaccgcatcaccgaaatcggcgtggtcgaaatc
ggtccgcttggcgtgtcgacgtggacgagcctcgtcaatcccgagcaggcgattccgccg
ttcatccagcaactgacgggcatttcggatgcgatggtgcgcgacgcgccgtcgttcgcg
tcgctcgcgccggcgctgttcgagcggctcgacggcaagctgttcgtcgcgcacaacgcg
agtttcgatcgcggtttcctgcgcgccgaattcgagcgcgccggcttggcgttcaatccc
gatgtgctgtgtacggtccggctgtcgcgcgcgctgttcccgcgcgaatcgcggcacggg
ctcgacgcgttgatcgagcggcacggtctcgttccggctgcgcgccaccgcgcgctggcg
gatgccgatctgctgtggcagttctggcgccagttgcacgacatcgtgccgctcgagcgg
ttgcgcgaccagatcgcgcgcacgacgcgccacttccgcctgggcggcgatctgaccgag
gcgtggctcgacaccgcgcctgccggctgcggcgcctatgcgttgttcggggagggcgac
gcgccgctgtatgtgggccgaagcgtgagggtgcggcagcggctgcgcgcgctgctgacc
ggcgagcgccgttcgtcgaaggagatgcggctggcccagcaggtgcggcgcgtcgaatgg
cgcgagaccggcaacgaactgggcgcgatgctggcggaagcgcaatggatcgcccaactg
cggccgtcgtacaaccggcgccccgcggccgatggcgtgcgtggcggcaatgcgcactgg
ccgttcgacggcgccgttgcgttcgaggcgaacggcgagcgccgcctgttgcatgtgatc
gacggctggcgctacctcggcacggccgaatcgctcgatgcggccgcgcggctcgccgcc
gaggcggcggacggcacgttcgaaccctttacccatcgcctgctgcagacgcatctcgcg
cgcgggctgcaactgattccgctcgccgcgctcacgccggcaggttga
DBGET
integrated database retrieval system
