Burkholderia seminalis: WJ12_05015
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Entry
WJ12_05015 CDS
T04851
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bsem
Burkholderia seminalis
Pathway
bsem03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
WJ12_05015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsem03019
]
WJ12_05015
03009 Ribosome biogenesis [BR:
bsem03009
]
WJ12_05015
Messenger RNA biogenesis [BR:
bsem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WJ12_05015
Ribosome biogenesis [BR:
bsem03009
]
Eukaryotic type
Pre-60S particles
RNases
WJ12_05015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AOJ24245
LinkDB
All DBs
Position
1:1110289..1110909
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AA seq
206 aa
AA seq
DB search
MTDTAASASQPALVRNELNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDIAVEGPVFAI
HQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEAEAAAQLQAFLAQYVSPGKSPMCGNS
ICQDRRFMARWMPEFERFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESI
DELKYYREHFLIPAASAPAGESAPAA
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgccgcttccgccagccagcccgcgctcgtgcgcaacgagttgaacctc
gtctggctcgacatggagatgacgggcctcgacccggataacgaccgcatcatcgagatc
gcggtcgtcgtgaccaattccacgctcgacatcgcggtcgaaggccccgtgttcgcgatc
caccagagcgacgagacgctcgcgaagatggacgactggaacaagtcgacgcacgggcgc
tcgggcctgatcgaccgcgtgcgcgcgtcgaccgtgaccgaggcggaagccgccgcgcag
ttgcaggcgttccttgcgcagtacgtgtcgcccggcaagtcgccgatgtgcggcaactcg
atctgccaggaccgccgtttcatggcgcgctggatgccggaattcgagcggttcttccac
taccgcaatctcgacgtcagcacgctcaaggagctgtgccgccgctggcagcccgcgatc
tacaagggtttccagaagcgtgcgatgcatacggcgctcgcggacatccacgagtcgatc
gacgagctgaagtactaccgcgagcatttcctgattccggccgcatcggcgccggcaggc
gaatccgcgccggccgcctga
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