Burkholderia seminalis: WJ12_05940
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Entry
WJ12_05940 CDS
T04851
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
bsem
Burkholderia seminalis
Pathway
bsem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WJ12_05940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsem03400
]
WJ12_05940
Enzymes [BR:
bsem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
WJ12_05940
DNA repair and recombination proteins [BR:
bsem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WJ12_05940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AOJ24413
LinkDB
All DBs
Position
1:1295684..1299022
Genome browser
AA seq
1112 aa
AA seq
DB search
MLHLFYSNRHETLADALLEDLAAFPARNGPWAPQQVIVPSAALRRRLELDIAARNGVCAN
VEFTYLAQWLWAQIGRVMEVPKRSPFAPDRLVWRCYRLLAQAAGGAPWLASPRLAAYLSA
SDDAMRYELAHRVAAVLDHYLTYRPEWLAAWQAGESVLAGDAAPRGISDAARDDERWQAA
LWRALLAELSDSGTPPAHRFLVEARHLDAETVARADWPESVSVFALPTMPPLHVALLREL
SRWIDVRVYALNPCREFWFDIVTAAHAETLDAAGRLDYQEVGHPLLAEWGRQTQAQLHML
HELTESAASGDASRFVENPAPTWLARVQNAILELRPEAETGDTPAERGIEVHVCHSLARQ
LEVLHDRLLAWFDADASLQPSDVLVAVADLAAAGPLIDAVFGTAGAGGARVPYRITGLPP
SQANPVARVLLDWLTLPERQVGAPELVEWLRVDAVAARYDIDAAALETVQTWLAAAGARR
GLSPLVSGDAAVPAPRHTFSDALARLFLGYAMPEGAAPIGAWLPIEAATGSEAELLGRLA
RFTDDLDGFARRLAESHTPSGWSELFADTLARFFDSGAAYADALAGVRDALDAMLAAMTE
GAPDEALPAAVVRAGLAAALDDPARGGVPWGGVTFSSLTSLRGLPYRVVCLLGMDDGVLP
SLARADEFDLMAVLPKLGDRQRRDDERNLFLDLLLAARDRLLIAYTGRSIRDNAPLPPAA
LVDELLDHLAIVTAGPDAAPDAVDAARRAFIVEHPLQPFAAAYFQPGSALVSYDAERATL
ASLLAAEASRDGPRELPFFAQPLPAEPVEPVAFSEFERFWRHPARALLRGRLGIVLADAQ
AELLDTEPFSLDFAGSDALAERVLPLLIESDEGTVHDHALRIADASPELPGGATGTVWRD
QALGSMTQLASSVRRALADGIERRPFSLTVVPAWPDTEQALFGTDDAMLSADAVSAPLEL
QGTLNRLTPAGQIIYRYARPSARDYLSAWLAHLVYCAVEPGGPRRTLWFGSGGAFELTPV
AAPLERLAPLAALFRAGRRMPLRFFPRSAWARVSDGEAKAASVWINERVVSEADDPAIAI
AWRGAHPSLDEPFGTLARLVFEPLIEHLKEVA
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgctccatctcttctattcgaaccgtcacgagacgctggccgacgcgctgctcgaggat
ctggccgcgttcccggcccgcaacggcccgtgggcgccgcaacaggtcatcgtgccgagc
gcggcgctgcgccgtcgtctcgagctcgacatcgccgcacgcaacggcgtgtgcgcgaac
gtcgagttcacgtatctcgcgcagtggctgtgggcgcagatcggccgcgtgatggaggtg
cccaagcgttcgccgttcgcgcccgaccgtctcgtgtggcgctgctaccggctgctcgcg
caggcggccggcggcgcgccatggctcgcctcgccacggctggccgcgtacctgtccgcc
tccgacgatgcgatgcgctacgagctcgcgcaccgcgtcgcggccgtgctcgatcattac
ctgacctatcgccccgaatggctggccgcctggcaggccggcgaatccgtgctcgcgggc
gacgccgcgccgcgcgggatcagcgacgccgcacgcgacgacgagcgctggcaggccgcg
ctgtggcgcgcgctgctcgccgagctgagcgacagcggcacgccgcccgcgcaccgtttc
ctcgtcgaggcgcgccatctcgatgctgaaacggtcgcgcgcgcggactggccggaatcg
gtcagcgtgttcgcgctgccgacgatgccgccgctgcacgtcgcgttgctgcgcgagctg
tcgcgctggatcgacgtgcgcgtctatgcgctgaacccgtgccgcgaattctggttcgac
atcgtcacggccgcgcacgccgagacgctcgatgcggccgggcggctcgactatcaggaa
gtcggccatccgctgctcgccgagtggggccggcagacgcaggcgcagctgcacatgctg
cacgagctgactgaaagcgccgcgtcgggcgatgcctcgcgcttcgtcgagaatcccgcg
cccacgtggctcgcacgcgtgcagaacgcgatcctcgagctgcggccggaggccgaaacc
ggcgacacgccggccgagcgcggcatcgaggtgcacgtgtgccacagcctcgcgcgccag
ctcgaggtgctgcacgaccgcctgctcgcgtggttcgacgccgatgcgagcctgcagccg
tccgacgtgctggtcgcggtggccgacctcgcggcggccgggccgctgatcgatgcggtg
ttcggcacggccggcgccggcggcgcgcgcgtgccttaccggatcaccggcctgccgccg
tcgcaggcgaacccggtcgcccgcgtgctgctcgactggctcacgttgccggaacggcag
gtcggcgcgccggagttggtcgaatggctgcgcgtcgatgcggtggccgcgcgatacgac
atcgacgcggccgcgctcgagacggtgcagacctggctcgcggccgccggcgcgcggcgc
gggctgtcgccgctcgtcagcggcgacgcggccgtgcccgcgccgcgccatacgttctcc
gatgcgctcgcgcggctttttctcggctatgcgatgccggaaggcgcggcgccgatcggc
gcgtggctgccgatcgaggcggccacgggcagcgaggccgaactgctcggccggctggcg
cgctttaccgacgatctcgacggcttcgcgcgtcgcctggccgaatcgcacacgccgagc
ggctggagcgaactgttcgccgatacgctcgcgcgcttcttcgattcgggcgccgcatat
gcggacgcgctggccggcgtgcgcgatgcgctcgacgcgatgctggccgcgatgacggaa
ggggcgcccgacgaagcgttgccggccgcggtcgtccgcgcggggctggccgcggcgctc
gacgatccggcgcgcggcggggtgccgtggggcggcgtcacgttctcgtctctgacgagc
ctgcgcgggctgccgtatcgcgtcgtctgtctgctcgggatggacgacggcgtgctgccg
agcctcgcgcgcgcggacgaattcgacctgatggccgtgttgccgaagctcggcgaccgg
cagcgccgcgacgacgagcgcaacctgtttctcgacctgctgctggccgcgcgcgaccgg
ctgctgatcgcctatacgggccgcagcatccgcgacaacgcgccgttgccgcccgcggcg
ctcgtcgacgaactgctcgatcatctggcgatcgtcacggccgggcccgacgccgcgccg
gacgccgtcgatgccgcgcggcgcgcgttcatcgtcgagcatccgctgcaaccgttcgcg
gccgcgtatttccagcccggcagcgcgctcgtgtcctacgacgccgagcgggcgacgctc
gcgtcgctgctcgccgccgaagcgtcgcgcgacggcccgcgcgaattgccgttcttcgcg
cagccgctgccggccgaaccggtcgagcccgtcgcgttcagcgaattcgaacgcttctgg
cgccatccggcgcgcgcgttgctgcgcggccggctcggcatcgtgcttgccgacgcgcag
gccgaactgctcgatacggaaccgttctcgctcgacttcgccggcagtgatgcgctcgcc
gagcgcgtgttgccgctgttgatcgaatcggacgagggcacggtgcatgaccacgcgctg
cgcattgccgatgcgagccccgaactgccgggcggcgcgacgggcacggtgtggcgtgat
caggcgctcggctcgatgacgcagcttgcgtcgagcgtgcgccgcgcgctggccgacggc
atcgagcggcggccgttctcgctcacggtcgtgccggcatggcccgatacggagcaggcg
ttgttcggcacggacgacgcgatgctgtcggccgacgcggtgagcgcgccgctcgaattg
cagggcacgctgaaccggttgacgccggccgggcagatcatctatcgctacgcacgaccg
agcgcgcgcgactatctgtccgcatggctcgcgcatctcgtgtactgcgcggtcgagccc
ggcgggccgcgccgcacgctgtggttcggcagcggcggcgcgttcgagctgacgcccgtc
gcggcgccgctggaacggctcgcgccgcttgccgcgctgttccgcgcggggcggcggatg
ccgctgcggttctttccgcgcagcgcatgggcgcgggtgtccgacggcgaggccaaggcc
gcgagcgtgtggatcaacgaacgtgtcgtgagcgaagcggacgatccggcgatcgcgatc
gcatggcgcggtgcgcacccgtcgctcgacgagccgttcggcacattggcgcggctcgtg
ttcgagccgctgatcgagcatctgaaggaggttgcatga
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