KEGG   Burkholderia seminalis: WJ12_06675
Entry
WJ12_06675        CDS       T04851                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bsem  Burkholderia seminalis
Pathway
bsem02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bsem00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    WJ12_06675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bsem03021]
    WJ12_06675
Transcription machinery [BR:bsem03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     WJ12_06675
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF Sigma70_r4 HTH_23 HTH_24 HTH_28 HTH_11 GerE Xre-like-HTH HTH_20 HTH_38 HTH_3 HTH_IclR MarR_2 HTH_40 PhyR_sigma-like HTH_29 TnsD HTH_10 HTH_Tnp_ISL3 HTH_Crp_2 HTH_7 Trp_repressor LacI HTH_5 MarR HTH_17 TetR_N HTH_AsnC-type HVO_A0261_N
Other DBs
NCBI-ProteinID: AOJ24548
LinkDB
Position
1:1467986..1468495
AA seq 169 aa
MSADKLSLHREIDALYAGHHAWLRGWLSRKLGCAHRAADLAHDTFMRLLARDEPIGADEP
RAFLTTVAQRVLSNHWRREQIERAYLDVLAQRPEAHAPSPEERAVVLETLLEIDQLLDGL
PLAAKRAFLLAQLHGLTQAEIARELGVSLATVKRHLVKAGTQCFFAMAA
NT seq 510 nt   +upstreamnt  +downstreamnt
atgtccgctgacaagctgtctcttcatcgagaaatcgacgccctttatgccggccaccat
gcgtggctgcgcggctggctgagccggaagctcggttgcgcgcatcgcgcggccgatctg
gcgcacgacacgttcatgcgcctgctcgcacgcgacgagccgatcggcgccgacgagccg
cgcgcgttcctgacgacggtcgcgcagcgcgtgctgagcaatcactggcggcgcgagcag
atcgagcgcgcgtatctcgacgtgctggcgcagcgccccgaagcgcatgcaccgtcgccg
gaggagcgggccgtcgtgctcgagacgctgctcgaaatcgaccagctgctcgacggcctg
ccgctcgcggcgaagcgtgcgtttctgctcgcgcaactccacggccttacccaggccgag
atcgcgcgcgaactcggcgtgtcgctcgcgacggtgaagcgccatctcgtgaaggccggc
acgcagtgcttcttcgcgatggcggcctga

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