Burkholderia seminalis: WJ12_07295
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Entry
WJ12_07295 CDS
T04851
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
bsem
Burkholderia seminalis
Pathway
bsem00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
WJ12_07295
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bsem01007
]
WJ12_07295
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsem03016
]
WJ12_07295
Enzymes [BR:
bsem01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
WJ12_07295
Amino acid related enzymes [BR:
bsem01007
]
Aminoacyl-tRNA synthetase
Class II (U)
WJ12_07295
Transfer RNA biogenesis [BR:
bsem03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
WJ12_07295
Prokaryotic type
WJ12_07295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
B5
tRNA_bind
FDX-ACB
VapB_antitoxin
Motif
Other DBs
NCBI-ProteinID:
AOJ24660
LinkDB
All DBs
Position
1:1608630..1611059
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AA seq
809 aa
AA seq
DB search
MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDAD
KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEEGGKPFAIKLSKLRGVE
SQGMLCSARELKLSEDHSGLLVLPEDTPVGQDIRETLNLDDTIFEIKLTPNKADCLSVFG
IARETAAITGAPLTPVDIRPVRVELDETLPVRIAAPDLCGRFSGRVIRGVNARAKTPQWM
VERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLKLLNGNT
VELDETVGVISDAAQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKYNFST
DAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVDDQSVNLPQRAPVKMRVSRANRI
IGVKIGADEIASIFTRLGLSFEREDDAFLVTPPSHRFDIEIEEDLIEEVARIYGFEKIPA
RPPVATSEMRATNETRRSIHDIRHALAARDYAETVNFSFVDAEWEHDFAGNDNPIKLLNP
IASQLSVMRTTLFGSLVAVLRHNLNRRADRVRVFESGRVFLADPSVKAGELAVEGHAQPK
RVGALAYGPAVDEQWGVATRAVDFFDVKGDLEALLAPSAGRFVKAEHPALHPGRSARIEV
DGRAVGWIGELHPRLMQKYELPHAPVMFEIDADALIARALPAPTEVSKFPPVRRDIAVVV
DQAVEVQALFDEMKKALAEEACRFVQKVVLFDEFRAKSNTSGGLAAHEKSLAFRVTLQDA
AGTLQDEVVDQAIQTLVERMARAGARLRG
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgcaattccctgaatcctggttgagaacctttgtcgacccgcagctgacgaccgacgaa
ctgtcgcacgcgctgacgatggcggggctcgaagtcgaatcgctgagcaaggctgcgccg
ccgacgtcgaagatcgtcgtcggccgcgtgctcgaagtcgtcaagcatccggatgcggac
aagctcaatgtctgccaggtcgacgccggcaccggcgcgacgctgaacatcgtctgcggc
gcgccgaacgtcgcgcccggcatcaaggtgccggttgcattggtcggcgccgaactgccg
ccggcggaagagggcggcaagccgttcgcgatcaagctgtcgaagctgcgcggcgtggag
agccaggggatgctgtgctcggcacgcgagctgaagctgtccgaggaccacagcggcctg
ctggtcctgccggaagatacgccggtcggccaggatatccgcgagacgctcaatctcgac
gacacgatcttcgaaatcaagctgacgccgaacaaggccgactgcctgtccgtgttcggt
atcgcgcgcgagacggccgcaatcaccggcgcgccgctgacgccggtcgacatccgtccg
gtgcgcgtcgagctcgacgaaacgctgccggtgcgcatcgccgcgcccgatctgtgcggc
cgcttctcgggtcgcgtgatccgcggcgtgaacgcgcgcgcgaagacgccgcaatggatg
gtcgagcgtctcgagcgctcgggccagcgcagcgtgtccgcgctcgtcgacatctcgaac
tacgtgatgttcgaactcggccgcccgtcgcacgtgttcgatctcgacaagatccacggc
ggcatcgaggtgcgctggggcaagcgcggcgaatcgctgaagctgctcaacggcaatacc
gtcgaactcgacgaaacggtcggtgtgatttcggatgccgcccaggtcgaaagcctggcc
ggcatcatgggcggcgacagcacggccgtcacgctcgacacgaccaacatctatctcgaa
gccgcgttctggtggccggacagcatccgcggccgtgcgcgcaagtacaacttctcgacc
gatgcggcgcatcgcttcgagcgcggcgtcgattacgcgacgaccgtcgagcacgtcgag
cgcatcacgcagctgattctcgagatctgcggcggcaaggcgggcccggtcgacgatcag
tcggtgaacctgccgcagcgcgcaccggtgaagatgcgcgtgtcgcgtgcgaaccgcatc
atcggcgtgaagatcggcgccgacgagatcgccagcatcttcacgcgcctcggcctgtcg
ttcgagcgtgaagacgacgcgttcctcgtcacgccgccgtcgcaccgcttcgacatcgag
atcgaggaagacctgatcgaggaagtggcgcgcatctacggtttcgaaaagattccggcg
cgcccgccggtcgcgacgagcgaaatgcgcgcgaccaacgagacgcggcgctcgatccac
gacatccgtcacgcgctcgctgcgcgcgactacgcggaaaccgtcaacttcagcttcgtc
gatgcggagtgggagcacgatttcgccggcaacgacaacccgatcaagctgctgaacccg
atcgcgagccagctttcggtgatgcgcacgacgctgttcggcagcctggtcgccgtgctg
cgccacaacctcaaccgtcgcgccgatcgcgtgcgcgtgttcgagtcgggccgcgtgttc
ctcgccgatccgtcggtgaaggccggcgaactggcggtcgagggccatgcgcagccgaag
cgtgtcggcgcgctggcatacggtccggctgtcgacgagcagtggggcgtcgccacccgc
gcggtcgatttcttcgacgtgaagggcgatctcgaagcgctgctggcgccgtcggccggg
cgcttcgtgaaggccgagcatccggctctccacccgggccgcagcgcgcgcatcgaagtc
gatggccgtgcggtcggctggatcggcgagctgcacccgcgcctgatgcagaagtacgag
ttgccgcacgcgccggtgatgttcgagatcgacgcggacgcgctgattgcgcgtgcgctg
ccggcgccgaccgaggtgtcgaaattcccgccggtacgacgcgatatcgccgttgtcgtc
gatcaggcggtcgaggttcaggcacttttcgacgaaatgaagaaggcacttgccgaagag
gcctgccgattcgttcagaaggttgtactcttcgacgaatttcgtgcaaaatcaaatact
tccggtggccttgccgcgcacgagaagagccttgccttccgcgtgacgctgcaggacgcg
gctggcacgctacaggacgaggtcgtcgaccaggcgatccagacgctggtcgagcggatg
gctcgcgccggtgcgcgcctgcgcggctaa
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