Burkholderia seminalis: WJ12_07380
Help
Entry
WJ12_07380 CDS
T04851
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bsem
Burkholderia seminalis
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsem03009
]
WJ12_07380
Enzymes [BR:
bsem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
WJ12_07380
Ribosome biogenesis [BR:
bsem03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
WJ12_07380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AOJ24675
LinkDB
All DBs
Position
1:1625243..1626994
Genome browser
AA seq
583 aa
AA seq
DB search
MTDIHDIESSAPAVQAARADDAPEQDASAGGDERPRRGLRRGPRSLIARRRAAAKSKGAE
GEQPGGEGADAQPAETAEAQPARAPRNKDGAAKGGRKPAGKREGAAKAGQGGQGRRGAPK
AEGGPVKAEGDASQDELFAYVTSPAFDADNSAGGSGVRAPMLRRGRNQPANKRVLSPDDD
APKLHKVLAEAGMGSRREMEELIVAGRVSVNGEPAHIGQRIMPTDQVRINGKPVKRKLPN
KPPRVLLYHKPTGEIVSHADPEGRPSVFDRLPPMKTAKWLAVGRLDFNTEGLLMLTTSGD
LANRFMHPRYSVEREYAVRVVGELAEGMRQKLLHGVELDDGPANFLRIRDGGGEGTNHWY
HVALAEGRNREVRRMFEAVGLMVSRLIRTRHGPIPLPRGLKRGRWEELDDAQVRKLMATV
GLKAPTEEKGKRGGAGQAERRQPDPMETSMGFISREPVLTTHGQLDQPRRGGGRRGVPGL
PGLSGYGSLPVSPSGYGNRTGGGRDGNRGGMGGRDGNRAGGRDVDGNRASYGAGPKREGA
GGKRGGGKGGGNRNPNGNRADGAGNGGGQRGGQRPQRSRTRSR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
ttgactgatatccacgatattgaatcgtccgcgcctgccgtgcaggcggcgcgcgccgac
gatgcgccggagcaggatgcttcggccggtggcgacgagcgtccccgccgcggtttgcgg
cgcggcccgcgcagcctgatcgcgcggcgtcgcgcggcagccaagtcgaagggcgccgaa
ggcgagcagccgggcggcgaaggcgcggatgcgcagccggccgagacggccgaagcgcag
ccggcgcgtgcgccgcgcaacaaggacggtgcggccaagggggggcgcaagccggccggc
aaacgcgaaggcgcggccaaggctggccagggcggtcagggccggcgcggtgcgccgaag
gctgagggcggcccggtgaaggcggagggcgatgcgtcccaggacgagctgttcgcctac
gtgacgtcgcccgcattcgacgcggacaactccgcgggcggcagcggcgtgcgtgcgccg
atgctgcgccgcggccggaaccagccggcgaacaagcgcgtgctgtcgccggacgacgac
gcgccgaagcttcacaaggtgctggcggaggcgggcatgggctcgcgccgcgaaatggaa
gaattgatcgtcgccggccgcgtgtcggtgaacggcgagcccgcgcacatcgggcagcgc
atcatgccgaccgaccaggtgcggatcaacggcaagccggtcaagcgcaagctgccgaac
aagccgccgcgcgtgctgctgtaccacaagccgacgggcgagatcgtcagccacgcggat
ccggaaggccgtccgtcggtgttcgatcgcctgccgccgatgaagacggcgaaatggctt
gcggtgggtcgcctcgacttcaataccgaaggtctgctgatgctgacgacttcgggcgat
ctcgcgaaccgcttcatgcacccgcgctacagcgtcgagcgcgagtatgcggtgcgcgtc
gtcggcgagctggccgaagggatgcggcagaagctgctgcacggcgtcgagctcgatgac
ggtccggcgaatttcctgcgtatccgcgacggcggcggcgaagggacgaaccactggtat
cacgtcgcgctggccgaaggccgcaaccgcgaagtgcgccggatgttcgaggccgtcggc
ctgatggtgagccgcctgatccgtacgcgtcacggcccgatcccgctgccgcgcggcctg
aagcgcggtcgttgggaagagctcgacgacgcgcaggtgcgcaagctgatggcgacggtc
ggcctgaaggcgccgaccgaggagaagggcaagcgcggcggggctggccaggccgaacgc
cgtcagcccgatccgatggagacgtcgatgggtttcatcagccgtgagccggtgctgacg
acgcatgggcaactcgaccagccgcgccgcggtggcggcaggcgcggcgtgccggggcta
cccggcctgagcggctacggcagtctgccggtttcgccgtcgggctacggtaatcgtacc
ggcggtggccgtgacggcaaccgtggtggcatgggcggtcgcgacggcaaccgagccggc
ggccgcgatgtcgacggcaatcgcgcgtcgtacggcgcgggccccaagcgcgaaggcgcg
ggcggcaagcgcggcggcggcaagggcggcggtaatcgcaatccgaacggcaatcgggcg
gatggcgccggcaacggcggtggtcagcgcggcggccagcgtccgcagcgcagccgtacg
cgcagccgctga
DBGET
integrated database retrieval system
