Burkholderia seminalis: WJ12_07405
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Entry
WJ12_07405 CDS
T04851
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bsem
Burkholderia seminalis
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsem03016
]
WJ12_07405 (truB)
Enzymes [BR:
bsem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
WJ12_07405 (truB)
Transfer RNA biogenesis [BR:
bsem03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
WJ12_07405 (truB)
Prokaryotic type
WJ12_07405 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AOJ24680
LinkDB
All DBs
Position
1:1632942..1633874
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AA seq
310 aa
AA seq
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MTNAAPQRPRVPRRVLDGVLLLDKPVGLSSNDALIRAKRLLLAKKAGHTGTLDPLASGLL
PLCFGEATKFSQDLLEADKTYEATMRLGQRTATGDAEGDVIDTRPVECDRAAVEAALVRF
TGEIVQVPPMYSALKRDGKPLYEYARAGQTVEREGRNVTIHALELLACELPDVTFRVTCS
KGTYVRTLAEDIGEALGCGAHLTMLRRTGVGALTLEHAVTLDALSDAAEAARDAWLHPVD
ALLSTFPAVRLDDASAKRFLHGQRLPLSELGPIEAADGERVRVYDATRLLGVARKANGVL
APERLVVTAA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatgcagcaccccaacgtccgcgcgtgccccggcgcgtgctggatggcgtcctc
ctgctcgacaagccggtcggcctgtcgagcaacgatgcgctgattcgcgcgaagcgcctg
ctcctcgcgaagaaagccggccacaccggcacgctcgatccgctggcttcgggcctgctg
ccgctgtgtttcggcgaggcgaccaagttttcgcaggacttgctcgaggccgacaagacc
tacgaagcgacgatgcgtcttggccagcgcacggctaccggcgatgcggaaggcgacgtg
atcgacacgcggccggtcgaatgcgaccgggcggcggtggaagccgcgctcgtgcgcttc
accggcgagatcgtgcaggtgccgccgatgtattcggcgctcaagcgcgacggcaagccg
ctgtacgaatacgcgcgtgcgggccagaccgtcgagcgggaaggccgtaacgtgacgatt
catgcgctcgaactgctcgcttgcgagctgcccgacgtgacgtttcgcgtgacctgcagc
aagggcacgtatgtgcgtacgctcgcggaagacatcggcgaggcgctcggttgcggggcg
catctgacgatgctgcgtcgtacgggcgtcggtgcattgacgctcgaacatgcggtgacg
ctcgatgcgctgtcggatgcagccgaagcggcacgcgatgcctggctccacccggtcgat
gcgctgctgtcgacgtttccggcggttcgtctcgacgatgcgtccgcgaagcggttcctg
cacggccagcgcctgccgttgtcggagctcgggccgatcgaggcggccgacggcgagcgc
gtgcgtgtatacgacgccacgcggctgctcggcgtggcgcgcaaggcgaatggtgtactt
gcaccggaacggctcgtcgtgacggctgcatga
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integrated database retrieval system
