Burkholderia seminalis: WJ12_08935
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Entry
WJ12_08935 CDS
T04851
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bsem
Burkholderia seminalis
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsem03009
]
WJ12_08935 (rimO)
Enzymes [BR:
bsem01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
WJ12_08935 (rimO)
Ribosome biogenesis [BR:
bsem03009
]
Prokaryotic type
ribosomal protein modification factors
WJ12_08935 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AOJ24947
LinkDB
All DBs
Position
1:complement(1983119..1984480)
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AA seq
453 aa
AA seq
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MSQSPKVGFVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTCGFIDEAVQES
LDAIGEALTENGKVIVTGCLGAKSSASGSNLIEEVHPKVLAVTGPHAVGEVMQAVHSHLP
KPHDPFTDLVPAAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVAEVMLEAE
NLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGKPIKTRMTDLVAALGELAAQYGAWVRL
HYVYPYPSVDEVIPLMAEGPFKGHVLPYLDVPFQHAHPEVLKRMKRPANAEKVLERVQKW
REICPDLTIRSTFIAGFPGETEEQFETLLDFIREAELDRVGCFAYSPVEGATANELDGAL
PDDVREARRARFMEVAEEVSANRIQRKVGKTLKVLIDEVSEEGGIGRTAADAPEIDGVVY
VEPAAKASKRYKVGDFVSVKITGADGHDLWGEV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaatcccccaaagtagggttcgtatccctcgggtgccccaaggcgctcgtcgac
tccgaacagatcatcacgcagttgcgcgccgaaggttatgaaatctccggcacctacgac
ggcgccgacctcgtcgtcgtgaacacctgcggcttcatcgacgaagccgtgcaggaaagc
ctcgacgcgatcggcgaagcgctgaccgagaacggcaaggtgatcgtcaccggctgcctc
ggcgcgaagtcgagcgcgagcggctcgaacctgatcgaggaagtccatccgaaggtgctc
gccgtcaccggcccgcacgcggtgggcgaagtgatgcaggccgtgcattcgcacctgccg
aagccgcacgacccgttcaccgatctcgtgcccgccgccggcatcaagctcacgccgcgt
cactacgcatacctgaagatttccgaaggctgcaaccaccgctgcacgttctgcatcatc
ccgtcgatgcgcggcgacctcgtgtcgcgcccggtcgccgaagtgatgctggaagccgag
aacctgttcaagtcgggcgtgaaggaactgctcgtgatctcgcaggacacgagcgcctac
ggcgtcgacgtgaagtaccgcacgggcttctggaacggcaagccgatcaagacgcgcatg
accgacctggtcgccgcgctcggcgaactcgccgcgcagtacggcgcgtgggtgcgcctg
cactacgtgtacccgtatccgagcgtcgacgaagtgattccgctgatggccgaaggtccg
ttcaagggccacgtgctgccgtatctcgacgtgccgttccagcacgcgcaccccgaggtg
ctgaagcgcatgaagcgcccggcgaacgccgagaaggtgctcgagcgcgtgcagaagtgg
cgcgagatctgcccggacctgacgatccgcagcacgttcatcgcgggcttccccggcgag
acggaagagcagttcgaaacgctgctggacttcatccgcgaggcggaactcgaccgcgtc
ggctgtttcgcgtattcgccggtcgaaggcgcgaccgcgaacgaactcgacggcgcgctg
ccggacgacgtccgcgaggcacgccgcgcgcgcttcatggaagtcgccgaggaagtgtcg
gcgaatcgcatccagcgcaaggtcggcaagacgctcaaggtgctgatcgacgaagtcagc
gaggaaggcggcatcggccgcaccgcggccgacgcgccggagatcgacggcgtcgtctat
gtcgaaccggcggcgaaggcatcgaagcgctacaaggtcggcgatttcgtgtccgtgaag
atcacgggcgcggacggtcacgatctgtggggcgaggtgtaa
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