Burkholderia seminalis: WJ12_09955
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Entry
WJ12_09955 CDS
T04851
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bsem
Burkholderia seminalis
Pathway
bsem03030
DNA replication
bsem03430
Mismatch repair
bsem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WJ12_09955
03430 Mismatch repair
WJ12_09955
03440 Homologous recombination
WJ12_09955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsem03032
]
WJ12_09955
03400 DNA repair and recombination proteins [BR:
bsem03400
]
WJ12_09955
Enzymes [BR:
bsem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WJ12_09955
DNA replication proteins [BR:
bsem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WJ12_09955
DNA repair and recombination proteins [BR:
bsem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WJ12_09955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Peripla_BP_3
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AOJ25137
LinkDB
All DBs
Position
1:2203478..2204095
Genome browser
AA seq
205 aa
AA seq
DB search
MQTVAVLDFETTGLSPNMGDRATEIAVILLRDGQIVDRFQSLMNAGRRIPSDVVALTGIT
NDMIASAPPASEVMKEAAAFVGKHAVVAHNAGFDKRFWQSELGQLGMPAEHAFACTMLVA
RRIYPDARSHRLSSLVEMLRLPKSGRAHRAMVDAEMAGHLWCRLQHDIARTYGLDRIDHA
LMSRVQATSKAKVPTYLRSLGCAHA
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccgtcgcggtactggacttcgaaaccaccgggctgtcgccgaacatgggcgac
cgtgcgaccgaaatcgccgtcatccttctgcgtgacgggcagatcgtcgaccgcttccag
agcctgatgaatgcgggccggcgcatcccgtccgatgtcgtcgcgctcaccggcatcacg
aacgacatgatcgcgtcggcaccgccggcgtccgaagtcatgaaggaagccgcggcgttc
gtcggcaagcatgcggtcgtcgcccacaacgccggtttcgacaaacgcttctggcagtcg
gagctcgggcagctcggcatgccggccgagcatgcgttcgcctgcacgatgctggtggcg
agacggatctacccggacgctcgcagtcatcgcctgtcgagcctggtcgagatgctgcgg
ttgccgaaatcgggccgcgcgcaccgggcgatggtcgatgccgaaatggccggccatctg
tggtgccggttgcagcacgacatcgcccggacgtacgggctggatcgcatcgatcacgcg
ctgatgtcgcgggtccaggcaacgagcaaggcgaaggtgccgacgtatctgcgttcgctc
gggtgcgcgcacgcgtag
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