Burkholderia seminalis: WJ12_12260
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Entry
WJ12_12260 CDS
T04851
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
bsem
Burkholderia seminalis
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsem02000
]
WJ12_12260
Transporters [BR:
bsem02000
]
Other transporters
Pores ion channels [TC:
1
]
WJ12_12260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
AOJ25547
LinkDB
All DBs
Position
1:complement(2716822..2720895)
Genome browser
AA seq
1357 aa
AA seq
DB search
MTKDPNDTPPPHDPDSPDGAPDTPPRAPRRGRVVRIAAWTFATVVLLVVLALGLVLGAVT
TERGTRLAWQVAGHVLGTRLAGTLEGGSLATGVRLRGFAWTSPDGSGTEVRIDRLDGRWA
LTRAPWRLSIAYLRAGTIDVRIAPGPSTPGTTPQDLSLPLQLRIDDLRVDHLAIHDGGST
TQLDHLALSGRSDGRHHELVLDGVDTPYGALTARAKLDGVKPFALSGEATYAGKLSDEPV
DARARVSGSLEALVADVDASGMKLNGRAHVEAAPFGDVPLTRASLAFDHVNPQALSPGAP
AADLAVRAALAPVTAPAGAAPVKGFAVTGPVSIVNAKPGTLGDHLLPVIDAHANVHLDAH
AQRIDDLALKLIRDGSVTGNGTLKGGKGRFDLKVANLDLNAFVAELRPMRLGGPLGVTLA
GDATTVDFNLNDPKLALGARAKVALTPQQTVLTDARVTAGKGRIDLTGVFRHDAHSSYDA
KATLTAFDPLLLAAMSAPQAGGGKAPAKAAKAPAKHGETRVSGTLTASGAFAPQVSTKAT
FKLGDSLYDGVPLTGAGVVQLAGSRILPSNANLSIAGNHVDLRGSFGAPGDRLRFVVDAP
QLDRLGFGIEGLVQAQGDLTGSFAHPNVTATYKAERVVVGSNRIGAAQGRADIRDGAHGA
LVFTADATDIALGSFKLKSLRANLDGTRAKHTLDASALGMADGRVIDLTLAANGGVVENR
DGMRWDGTVTRLANRGTPAVALQAPLTVSAGAGRVTLGATRLTLEGAAIDLKSFVFDHGQ
MRSAGSVSGVSVARFLEVRQELTGQRPPVRTDVVLDADWDFSLGANATGHVQVKRRGGDV
TIESGRGIASLGLTDLSARASFTPGNRLNVTALAKASRIGTLDANVTVPFALRDGVFGVV
NDGPLSGRIDADIPALKTTGNLFGPSYLLGGRAALKLTVAGTPAKPNLSGMLTGDDLSAT
LIDQGVQLKDGIVRVKLSDNLVEFQQVEFHGGDGTLRALGRVRLDGEAPDLTASIVADKL
ELFAAPDRKLSLSGKATVANDGPRGALSIDGKFVVDRALFDLPEESAPHLSDDVVIVQPD
GTVRGETPTGTAAAKPKPAGDKPAPSLAPRANIDIGLGNNFRFKGHGADLGLRGTITVMS
APGVPLRAVGNVRVTEGSTYTSFGRKLAIENGFFTFNGPVSNPGVNILAMRRNQEVEAGV
QVTGTIQSLTVKLVSEPNVTDNEKLSWLLFGHGTDQGNNVGQQGAMTAALGLLGSVTGKR
VAQTFGLDEVSVGRSEVGLTDPQVVLVSKAINERFVLGFEQGLQSASNAFKATINLTRFW
SVSAYGGTFQGVDLNYTRRFDRWFGSDAARTRRSEQP
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaggacccgaacgacacgccgccgcctcacgatccggactcgcccgacggcgcg
cccgacacgccgccgcgcgcgccgcgccgcggccgggtggtgcgcatcgccgcatggacg
ttcgcgacggtcgtgctgctcgtcgtgctggcgctggggctcgtgctgggcgcggtgacg
accgagcgcggcacgcggctcgcgtggcaggtggccgggcacgtgctcggcacccggctt
gcggggacgctggaaggcggctcgctcgcgaccggcgtgcggctgcgcggcttcgcgtgg
acgagccccgacgggtcgggcaccgaggttcggatcgaccggctcgacggccgctgggcg
ctcacgcgtgcgccgtggcggctgtcgatcgcctatctgcgcgccggcacgatcgacgtg
cggatcgcgccggggccgtcgacgccgggcacgacgccgcaggacctgagcctgccgctg
cagttgcggatcgacgacctgcgcgtcgatcacctcgcgatccacgacggcggctcgacg
acgcagctcgatcacctcgcgctgagcggccgcagcgacgggcgccaccacgaactcgtg
ctcgacggcgtcgatacgccgtacggcgcgctgaccgcgcgcgcgaagctcgacggcgtg
aagccgttcgcgctgagcggcgaggcgacctacgccggcaagctgtcggacgagccggtc
gacgcgcgggcccgcgtgtcgggctcgctcgaagcactcgtcgccgacgtcgacgcgagc
gggatgaagctgaacgggcgtgcgcacgtcgaagcggcgccgttcggcgacgtgccgctc
acgcgcgcatcgctcgcattcgatcacgtgaacccgcaggcgctttcgcccggcgcgccg
gcggccgatctcgcggtacgcgcggcactcgcgccggtgaccgcgccggccggcgcggcg
cccgtgaaggggttcgcggtgacgggccccgtgtcgatcgtcaacgcgaaaccgggcacg
ctcggcgaccatctgctgccggtgatcgatgcgcatgcgaacgtgcatctcgacgcgcac
gcgcagcggatcgacgatctcgcgctgaaactgatccgcgacggcagcgtgacgggcaac
ggcacgctgaagggcggcaagggccgcttcgacctgaaggtcgcgaacctcgacctgaac
gcgttcgtcgccgagctgcggccgatgcgtctcggcggcccgctcggcgtgacgctcgcg
ggcgacgcgacgaccgtcgacttcaacctgaacgacccgaagctcgcgctcggcgcgcgc
gcgaaagtcgcgctgacgccgcagcagactgtgctgaccgatgcgcgcgtgacggccggc
aaggggcgtatcgacctgacgggcgtgttccgccacgacgcgcattcgagctacgacgcg
aaggcgacgctgacggcgttcgatccgctgctgctcgccgcgatgagcgccccgcaggcc
ggcggcggcaaggcgcccgccaaggcggccaaggcgccggccaagcacggcgagacgcgc
gtgtcgggcacgctgacggcgtcgggcgcgttcgcgccgcaggtctcgacgaaggcgacc
ttcaagctcggcgacagcctgtacgacggcgtgccgctgaccggcgccggcgtcgtgcag
ctcgccggttcgcggatcctgccgagcaacgcgaacctgtcgatcgcgggcaaccacgtc
gacctgcgcggcagcttcggcgcgcccggcgaccggctgcgcttcgtcgtcgacgcgccg
cagctcgaccgactcggcttcggcatcgaagggctcgtgcaggcgcagggcgacctgacg
ggcagcttcgcgcatccgaacgtgacggccacctacaaggccgagcgcgtcgtcgtcggt
tcgaaccggatcggcgccgcgcaaggccgcgcggacatccgcgacggcgcgcacggcgca
ctcgtgttcacggccgacgcgaccgacatcgcgctcgggtcgttcaagctgaaatcgctg
cgcgcgaacctcgacggcacgcgcgcgaaacatacgctcgacgcgtcggcgctcgggatg
gccgacggccgcgtgatcgacctgacgctcgcggcgaatggcggcgtggtcgagaatcgc
gacgggatgcgctgggacggcaccgtcacgcgtctggccaatcgcggtacgccggccgtc
gcgctgcaggcgccgctgacggtgtcggccggcgccggccgcgtgacgctcggcgcgacg
cggctcacgctcgaaggcgcggcgatcgacctgaagtcgttcgtgttcgatcacggccag
atgcgctcggccggttcggtgagcggcgtgtcggtcgcgcggttcctcgaggttcgccag
gaactgaccggccagcggccgccggtgcggaccgacgtcgtgctcgacgccgactgggat
ttctcgctcggcgcgaacgcgacgggccacgtgcaggtgaagcgccgcggcggcgacgtg
acgatcgagagcgggcgcggcatcgcgtcgctcgggctcaccgacctgtccgcgcgcgcg
agcttcacgcccggcaaccggctcaacgtgacggcgctcgcgaaggcgagccggatcggc
acgctcgatgcgaacgtcacggtgccgttcgcgctgcgcgacggcgtgttcggggtcgtc
aacgacgggccgctgtcgggccgcatcgacgccgacattccggcgctgaagacgaccggc
aacctgttcgggccgagctatctgctgggcgggcgcgcggcgctgaagctgacggtcgcc
ggcacgcccgcgaagccgaacctgtcggggatgctgacgggcgacgatttgtccgcgacg
ctgatcgaccagggcgtgcagctgaaggacggcatcgtgcgcgtgaagctgtcggacaac
ctcgtcgaattccagcaggtcgagttccacggcggcgacggcacgctgcgcgcgctcggc
cgcgtgcgcctcgacggcgaggcgcccgacctgaccgcgagcatcgtcgcggacaagctc
gaactgttcgcggcgccggaccgcaagctgtcgctgtcgggcaaggcgaccgtcgcgaac
gacgggccgcgcggcgcgctgtcgatcgacggcaagttcgtggtcgaccgcgcgctgttc
gacctgcccgaggaatcggcgccacacctgtccgacgacgtcgtgatcgtgcagccggac
ggcacggtgcgcggcgagacgcccaccggcaccgcggccgcgaagccgaagccggccggg
gacaagccggcgccgtcgctggcgccgcgcgcgaacatcgacatcggcctcggcaacaac
ttccgcttcaagggccacggcgccgatctcgggctgcgcggcacgatcaccgtgatgagc
gcgccgggcgtgccgttgcgcgcggtcggcaacgtgcgcgtgaccgaaggctcgacgtac
acgtcgttcggccgcaagctcgcgatcgagaacggcttcttcacgttcaacggcccggtg
tcgaacccgggcgtcaacatcctcgcgatgcggcgcaaccaggaggtcgaggccggcgtg
caggtgacgggcacgatccagtcgctgacggtcaagctcgtgtcggagccgaacgtcacg
gacaacgaaaagctgtcgtggctgctgttcgggcacggcaccgaccagggcaacaacgtc
ggccagcagggtgcgatgacggcggcgctcgggctgctcggcagcgtgaccggcaagcgc
gtcgcgcagaccttcggcctcgacgaggtctcggtcggccgcagcgaagtcggcctgacc
gatccgcaggtcgtgctggtgtcgaaggcgatcaacgagcggttcgtgctcggcttcgag
caggggctgcagtcggcgagcaacgcgttcaaggcgacgatcaacctgacgcgcttctgg
tcggtgtccgcgtacggcggcacgttccagggcgtcgacctgaactacacgcgtcgtttc
gaccggtggttcggcagcgacgccgcgcgcacgcggcgttccgagcagccatga
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