Burkholderia seminalis: WJ12_12505
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Entry
WJ12_12505 CDS
T04851
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
bsem
Burkholderia seminalis
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsem03009
]
WJ12_12505
Enzymes [BR:
bsem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
WJ12_12505
Ribosome biogenesis [BR:
bsem03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
WJ12_12505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AOJ25591
LinkDB
All DBs
Position
1:2765527..2766243
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AA seq
238 aa
AA seq
DB search
MDLESILYTQGFGSRRQCRGLIEAGRVAVAGTAATDPDATFDTDGLVFEVDDTAWPFHER
AYLALNKPAGYECSRDPQHHASVFSLLPAPLVARGVQCVGRLDQDTTGLLLLSDDGQFVH
AYTSPKRKVPKTYVATVRHPLDDAQLNALRGGVQLHGEPKPIAAVAADARDTHALALTVL
EGKYHQVKRMVAAASNRVELLHRESIGGFTLPDDLAPGAWRWLDDADLSALRNPVKTL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgaaagcattctctacacccagggtttcggctcgcgccgccagtgccgcggc
ctgatcgaagcgggccgcgtcgccgtcgcgggcacggccgcgaccgatccggacgccacc
ttcgataccgacggcctcgtattcgaggtcgacgatacggcgtggccgttccacgaacgc
gcgtatctcgcgctcaacaagcccgccggctacgaatgctcgcgcgatccgcagcaccac
gcgagcgtgttcagcctgctgcccgcgccgctcgtcgcgcgcggcgtgcagtgcgtcggc
cgcctcgaccaggacacgaccggcctgctgctgctgtccgacgacggccagttcgtgcat
gcgtacacgtcgccgaagcgcaaggtgccgaagacctacgtcgcgaccgtgcgccacccg
ctcgacgacgcgcagttgaacgcgctgcgcggcggcgtgcagctgcacggcgagccgaag
ccgatcgcggccgtcgccgccgacgcgcgcgacacgcacgcgctcgcgctgaccgtcctc
gaaggcaaataccaccaggtcaagcgcatggtggcggcggcgagcaatcgcgtcgaattg
ctgcaccgcgaaagcatcggcggcttcacgctgccggacgatctcgcgccgggcgcgtgg
cggtggctcgacgacgccgacctttcagcgctgcgcaatcccgtcaaaaccctgtaa
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