Burkholderia seminalis: WJ12_14020
Help
Entry
WJ12_14020 CDS
T04851
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
bsem
Burkholderia seminalis
Pathway
bsem02020
Two-component system
bsem02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
WJ12_14020
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
WJ12_14020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bsem03021
]
WJ12_14020
Transcription machinery [BR:
bsem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
WJ12_14020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_38
HTH_Crp_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AOJ25877
LinkDB
All DBs
Position
1:3104188..3105693
Genome browser
AA seq
501 aa
AA seq
DB search
MKASLQLRLSQHLALTPQLQQSIRLLQLSTLELQQEVAMAVAQNPLLENDDEWIASPLRV
AADGSLIAQTPPAQNTEPASANGSSTSSDRAERDEPAGADDYDGYGSGDGNDGPQWNLDE
FGRASGASDDDDLPPLQVQEAATSLRDHLSAQLRVTQAGPRDRALVMFLIESLDDDGYLT
ATLDEVLADLPPELEIDCDELNAALALLHSFDPPGVGARSASECLKLQLLRLDPSPTRTL
ALEIVSQHLELLAARDFTRLRKHLKASDDALRDAHALIRSLEPFPGAAYGKAEADYVVPD
IIVKKAGQGWLAELNPEVVPRLRINNLYANILRNSRGDPSAGSLKQQLQEARWLIKNIQQ
RFDTILRVAQAIVERQKNFFAHGEIAMRPLVLREIADTLGLHESTVSRVTTGKYMLTPFG
TLEFKYFFGSHVSTDTGGAASSTAIRALIKQLIGAEDPKSPLSDSRIAELLAEQGFVVAR
RTVAKYREALKIPAVNLRKSL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccagccttcaactccgcctgtcgcaacacctggcgctgacgccgcagctgcag
cagtcgatccggctcctgcagttgtccacgctcgaattgcagcaggaagtcgcgatggcc
gtcgcgcagaacccgctgctcgagaacgacgacgaatggatcgcgagcccgctgcgtgtc
gcggcggacggatcgctgatcgcgcagacgccgcccgcgcagaacaccgagccggcctcg
gcaaacggcagcagcacgtccagcgatcgcgcggagcgcgacgagccggccggtgccgac
gactacgacggttacggttccggcgacggcaacgacggcccgcaatggaatctcgacgaa
ttcggccgcgcgagcggcgcgtccgacgacgacgacctcccgccgctgcaggtgcaggaa
gccgcgacgtcgctgcgcgaccacctgtccgcgcagttgcgcgtcacgcaggccggcccg
cgcgatcgcgcgctcgtgatgttcctgatcgagtcgctcgacgacgacggctacctgacc
gcgacgctcgacgaggtgctcgccgacctgccgcccgagctggagatcgactgcgacgaa
ctgaacgcggcgctcgcgctgctgcacagcttcgacccgcccggggtcggcgcacgctcg
gcgtccgaatgcctgaagctgcagctgctgcgcctcgatccgtccccgacgcgcacgctc
gcgctcgagatcgtgtcgcagcacctcgaactgctcgcggcccgcgatttcacacgattg
cgcaagcacctgaaggcgagcgacgacgcgctgcgcgacgcgcatgcgctgatccgctcg
ctggagccgttccccggcgccgcgtacggcaaggccgaggccgactacgtcgtgcccgac
atcatcgtgaagaaggccggccaggggtggctcgcggaactcaatccggaggtcgtgccg
cgcctgcggatcaacaacctgtacgcgaacatcctgcgcaacagccgcggcgatccgtcg
gccggttcgctgaagcagcagctccaggaagcgcgctggctgatcaaaaatatccagcag
cgtttcgacacgatcctgcgagtcgcgcaggctattgtcgagcgtcagaagaatttcttt
gcgcacggtgaaattgccatgcgccccttggttttgcgggaaatagctgatacgctgggc
ctacacgagtcgactgtcagccgtgtgacaaccgggaagtacatgctgaccccgttcggg
acgctggaatttaagtacttcttcggatctcacgtttcgaccgacaccggtggcgccgcc
tcgtcgaccgccatccgagccctcatcaagcaactgataggagctgaagacccaaaatcg
ccactttcggacagccgcattgccgagctgctggcagaacagggtttcgtggtcgcgcgc
cgcacggttgcgaaatatcgcgaagccctcaagatcccggcagtgaatctgcgcaagtct
ctttaa
DBGET
integrated database retrieval system
