Burkholderia seminalis: WJ12_15205
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Entry
WJ12_15205 CDS
T04851
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
bsem
Burkholderia seminalis
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bsem01011
]
WJ12_15205
Enzymes [BR:
bsem01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
WJ12_15205
Peptidoglycan biosynthesis and degradation proteins [BR:
bsem01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
WJ12_15205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Motif
Other DBs
NCBI-ProteinID:
AOJ26099
LinkDB
All DBs
Position
1:complement(3363266..3365218)
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AA seq
650 aa
AA seq
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MSNSLFRVYRAVALTLSAAALVAGTAACAAPNDDTVAGDDQIFVQLREAARRNDAAKAAQ
LASMIPNYPVPSYVEYFQIKPQLFDSTGRARVDAPDAPVQSFLQRYDGQAIADRLRNDYL
LVLGARHDWRNFDDQYKRFVLDDDTQVKCYALESRAARGENVADAARALLVEPKNYGDAC
VDLITALTVNQQFTSDDVWQQARLAYEQNYTTLGGKIVDALGPRPVGFDQATSAPPLYLA
RGVGADATSHQLALIALGRMARNDPDAAAGMLTTVAPSLTKQEQAIAWGAIGYQGAIKRS
PLASVWYAKSANAPLSNPGYEWRTRAALLAGNWPMVRWSIEQMPPSLRNDPAWIYWHARA
LKQSGDTLQANQEFEQVAGQFNFYGQLAGEELGQRTSIPPRTKVSDAEIDAMGKIPGFAL
AQRFYALNLRLEGNREWNWPLRGMTDRQLLAAAEYGKRVELLDRTVNTADRTKAEHDFTL
RYPSPYRNIVERYAQSTGLDVEWAYGLIRQESRFIISARSSVGAGGLMQLMPATAQMVAK
KLGMGTITRAQMHDIDTNIQLGTWYLADIYNNFDSSPVLATAGYNAGPGRPRQWRQVLTQ
PVEGAIFAETIPFNETRDYVKNVLSNTVYYAALFEGKPQSLKKRLGMISP
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacagccttttccgagtatatcgcgcggtcgcgctgacgctttcggccgccgcg
ctcgtcgccggtacggccgcgtgcgccgcaccgaacgacgacacggtcgccggggatgac
cagatcttcgtacagcttcgcgaagccgcacgccgcaacgacgccgcgaaagccgcgcag
ctcgcgtcgatgatcccgaactatccggtcccgtcctacgtcgagtatttccagatcaag
ccgcagctgttcgattcgacgggacgcgcgcgcgtcgatgcgccggacgcgcccgtgcag
tcgttcctgcagcgctacgacggccaggcgatcgccgaccgcctgcgcaacgattacctg
ctcgtgctcggcgcgcgccacgactggcgcaacttcgacgaccagtacaagcgcttcgtg
ctcgacgacgacacgcaggtcaagtgctacgcgctcgaatcgcgcgcggcgcgcggcgag
aacgtcgccgacgcggcgcgggcgctgctcgtcgagccgaagaactacggcgatgcgtgc
gtcgacctgatcaccgcgctcaccgtcaaccagcagttcacgagcgacgacgtgtggcag
caggcgcgcctcgcctacgagcagaactacacgacgctcggcggcaagatcgtcgacgcg
ctcggcccgcgcccggtcggtttcgaccaggcgacgagcgcgccgccgctgtacctcgcg
cgcggcgtcggcgccgacgcgacgtcgcaccagctcgcgctgatcgcactcggccgcatg
gcgcgcaacgatccggacgccgccgcggggatgctgacgacggtcgcgccgtcgctgacc
aagcaggaacaggcgatcgcgtggggcgcgatcggctaccagggcgcgatcaagcgttcg
ccgctcgcgtcggtctggtacgcgaaatccgcgaacgcgccgctgtcgaatccgggctac
gaatggcgcacgcgcgccgcgctgctcgccggcaactggccgatggtgcgctggtcgatc
gagcagatgccgccgtcgctgcgcaacgatccggcgtggatctactggcatgcgcgcgcg
ctcaagcagagcggcgacacgctgcaggcgaaccaggaattcgagcaggtcgccgggcag
ttcaacttctacgggcagctcgccggcgaagagctcggccagcgcacgtcgatcccgccg
cgcaccaaggtgagcgacgccgagatcgacgcgatgggcaagattccgggcttcgcgctc
gcgcagcgcttctacgcgctgaacctgcgcctcgaaggcaatcgcgaatggaactggccg
ctgcgcgggatgaccgatcgccagctgctcgcggccgccgaatacggcaagcgcgtcgag
ctgctcgaccgcacggtcaacacggccgaccgcacgaaggccgagcacgacttcacgctg
cgctacccgtcgccgtaccgcaacatcgtcgagcgctatgcgcaatcgacgggcctcgac
gtcgaatgggcgtacgggctgatccgccaggaatcgcgcttcatcatcagcgcgcgttcg
tcggtgggcgcgggcggcctgatgcagctgatgcccgcgacggcccagatggtcgcgaag
aagctcggcatgggcacgatcacgcgtgcgcagatgcacgacatcgataccaacatccag
ctcggcacctggtatctggcggacatctacaacaacttcgacagctcgccggtgctcgcc
accgccggctacaacgcgggcccgggccggccgcgccagtggcgccaggtgttgacgcag
ccggtcgaaggcgcgatcttcgcggagacgattccgttcaacgagacgcgcgactacgtg
aagaacgtgctgtcgaataccgtctactacgcggcgctcttcgagggcaaaccgcagtcg
ttgaagaaacgtctaggcatgatctcgccctga
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