Burkholderia seminalis: WJ12_16955
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Entry
WJ12_16955 CDS
T04851
Name
(GenBank) DNA-binding protein
KO
K10979
DNA end-binding protein Ku
Organism
bsem
Burkholderia seminalis
Pathway
bsem03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
WJ12_16955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsem03400
]
WJ12_16955
DNA repair and recombination proteins [BR:
bsem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
WJ12_16955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AOJ26625
LinkDB
All DBs
Position
3:complement(248267..249262)
Genome browser
AA seq
331 aa
AA seq
DB search
MARMIWKGAISFGLVHVPVQLFPATRTVKPSFRLLDKRSMDPVGYRQINKRTGKEVTRED
IVRGYEYEKERYVVLTDDEIRAANPESTQTVDIVTFVDEDAVSFLYLDTPYYLVPDRKGE
KVYALLRDALKDSGKIGIAHVVMRDRQHLGALIPVGPLLALDTLRLQEELRPLDELSVPA
DDAKRAGVSARELAMAKKLIEDMSGSWSPDAYHDTFRDDILELVERKVRAGRIEEIEDRP
AQTGRAASNVVDLTELLKRSLKGGGRAGGGDDDADTEASAPSRAAGARRKPAAKAPAKRA
AKAPAKRTAAKHGATGAHSAKKAAARRKHAA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcacggatgatctggaaaggcgcgatcagcttcgggctcgttcacgtgcccgtgcag
ctgttcccggccacgcgcaccgtgaagccgtcgttccggctgctcgacaagcgctcgatg
gacccggtcggctaccggcagatcaacaagcgcaccggcaaggaagtcacgcgcgaggac
atcgtgcgcggctacgagtacgagaaggagcgctacgtcgtgctgaccgacgacgagatc
cgcgcggcgaaccccgaatcgacgcagacggtcgacatcgtcacgttcgtcgacgaggac
gccgtgtcgttcctgtatctcgacacgccgtactacctcgtgccggaccgcaagggcgag
aaggtctatgcgctgctgcgcgacgcgctgaaggacagcggcaagattggcatcgcgcac
gtcgtgatgcgcgaccgccagcatctcggcgcgctgattccggtcgggccgctgctggcg
ctcgacacgctgcgcttgcaggaggagctgcgcccgctcgacgaactgtcggtgccggcc
gacgacgcgaaacgtgccggcgtcagcgcgcgcgaactcgcgatggcgaagaagctgatc
gaagacatgtccggatcgtggtcgcccgacgcgtatcacgacacgttccgcgacgacatc
ctcgagctggtcgagcgcaaggtccgcgcgggccggatcgaggagatcgaggaccggccc
gcgcagactgggcgtgcggcgtccaacgtcgtcgatctgaccgaattgctcaagcgcagc
ctgaagggtggcgggcgcgcgggcggtggggacgacgatgcggatactgaagcatcggcg
ccttcgcgtgcggccggcgcgcgtcgcaaaccggcggcgaaagcgcccgccaaaagagcg
gcgaaggcgcccgcgaaacggacggccgcgaagcacggcgccaccggtgcgcactcggcg
aagaaggccgccgcgcgccgcaagcacgccgcatga
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