KEGG   Burkholderia seminalis: WJ12_16955
Entry
WJ12_16955        CDS       T04851                                 
Name
(GenBank) DNA-binding protein
  KO
K10979  DNA end-binding protein Ku
Organism
bsem  Burkholderia seminalis
Pathway
bsem03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bsem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    WJ12_16955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bsem03400]
    WJ12_16955
DNA repair and recombination proteins [BR:bsem03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     WJ12_16955
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: AOJ26625
LinkDB
Position
3:complement(248267..249262)
AA seq 331 aa
MARMIWKGAISFGLVHVPVQLFPATRTVKPSFRLLDKRSMDPVGYRQINKRTGKEVTRED
IVRGYEYEKERYVVLTDDEIRAANPESTQTVDIVTFVDEDAVSFLYLDTPYYLVPDRKGE
KVYALLRDALKDSGKIGIAHVVMRDRQHLGALIPVGPLLALDTLRLQEELRPLDELSVPA
DDAKRAGVSARELAMAKKLIEDMSGSWSPDAYHDTFRDDILELVERKVRAGRIEEIEDRP
AQTGRAASNVVDLTELLKRSLKGGGRAGGGDDDADTEASAPSRAAGARRKPAAKAPAKRA
AKAPAKRTAAKHGATGAHSAKKAAARRKHAA
NT seq 996 nt   +upstreamnt  +downstreamnt
atggcacggatgatctggaaaggcgcgatcagcttcgggctcgttcacgtgcccgtgcag
ctgttcccggccacgcgcaccgtgaagccgtcgttccggctgctcgacaagcgctcgatg
gacccggtcggctaccggcagatcaacaagcgcaccggcaaggaagtcacgcgcgaggac
atcgtgcgcggctacgagtacgagaaggagcgctacgtcgtgctgaccgacgacgagatc
cgcgcggcgaaccccgaatcgacgcagacggtcgacatcgtcacgttcgtcgacgaggac
gccgtgtcgttcctgtatctcgacacgccgtactacctcgtgccggaccgcaagggcgag
aaggtctatgcgctgctgcgcgacgcgctgaaggacagcggcaagattggcatcgcgcac
gtcgtgatgcgcgaccgccagcatctcggcgcgctgattccggtcgggccgctgctggcg
ctcgacacgctgcgcttgcaggaggagctgcgcccgctcgacgaactgtcggtgccggcc
gacgacgcgaaacgtgccggcgtcagcgcgcgcgaactcgcgatggcgaagaagctgatc
gaagacatgtccggatcgtggtcgcccgacgcgtatcacgacacgttccgcgacgacatc
ctcgagctggtcgagcgcaaggtccgcgcgggccggatcgaggagatcgaggaccggccc
gcgcagactgggcgtgcggcgtccaacgtcgtcgatctgaccgaattgctcaagcgcagc
ctgaagggtggcgggcgcgcgggcggtggggacgacgatgcggatactgaagcatcggcg
ccttcgcgtgcggccggcgcgcgtcgcaaaccggcggcgaaagcgcccgccaaaagagcg
gcgaaggcgcccgcgaaacggacggccgcgaagcacggcgccaccggtgcgcactcggcg
aagaaggccgccgcgcgccgcaagcacgccgcatga

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