Burkholderia seminalis: WJ12_17025
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Entry
WJ12_17025 CDS
T04851
Name
(GenBank) hydroxyacid dehydrogenase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bsem
Burkholderia seminalis
Pathway
bsem03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WJ12_17025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsem03400
]
WJ12_17025
Enzymes [BR:
bsem01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
WJ12_17025
DNA repair and recombination proteins [BR:
bsem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WJ12_17025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AOJ27289
LinkDB
All DBs
Position
3:258370..259035
Genome browser
AA seq
221 aa
AA seq
DB search
MTRQPPGRSTPSSAEDDAPPTLDACRRCTLWEHATQPVPGAGPRDASIMLVGEQPGDQED
RAGLPFVGAAGRLLDRALGEAGIERTHVYLTNAVKHFKWEPRGKRRLHKTPAQREVAACR
YWLERELDAVRPRVVVALGATALRAVLQDHDATLERTRAPVRTAGGQLVVATYHPSYVLR
TRGADSREHAYRTLVDALRTASDLARDARRGGTRGAHGNAG
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgacccgccagccgccgggccgctcaacaccgtcgtccgccgaagacgacgcgccgccg
acgctcgacgcgtgccgccgctgcacgctgtgggaacacgcgacgcagccggtacccggc
gcgggaccgcgcgacgcgtcgatcatgctggtcggcgagcagccgggcgaccaggaagac
cgcgcgggcctgccgttcgtcggcgcggccggccgcctgctcgaccgcgcgctcggcgaa
gccgggatcgaacgcacgcacgtgtacctgaccaacgcggtcaagcacttcaaatgggaa
ccgcgcggcaagcggcggctgcacaagacgcccgcgcagcgggaggtggccgcgtgccgc
tactggctcgaacgcgaactcgatgcggtgcgcccgcgggtggtcgtcgcgctcggcgcc
acggcgctgcgcgcggtgctgcaggaccacgacgcgacgctcgagcgcacgcgcgcgccg
gtgcgtaccgccggcgggcagctcgtcgtcgcgacctatcatccgtcgtacgtgctgcgc
acgcgcggcgccgattcgcgcgagcacgcgtaccggacgctcgtcgacgcgctgcgcacc
gcatcggacctcgcgcgcgacgcacgccgcggcggcacgcgcggcgcgcacggcaacgcc
ggatga
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