Burkholderia seminalis: WJ12_18530
Help
Entry
WJ12_18530 CDS
T04851
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
bsem
Burkholderia seminalis
Pathway
bsem00541
Biosynthesis of various nucleotide sugars
bsem01100
Metabolic pathways
bsem01250
Biosynthesis of nucleotide sugars
Module
bsem_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
WJ12_18530
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bsem01005
]
WJ12_18530
Enzymes [BR:
bsem01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
WJ12_18530
Lipopolysaccharide biosynthesis proteins [BR:
bsem01005
]
Lipid A
WJ12_18530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
AOJ26900
LinkDB
All DBs
Position
3:complement(604576..605421)
Genome browser
AA seq
281 aa
AA seq
DB search
MNVTLTPDVTVGNDLPFVLFGGLNVLESLDFTLDVCGTFVEVTRRLGIPLVFKASFDKAN
RSSIHSYRGVGFDKGLRIFDAVKRRFGVPVITDVHETWQAGPVSQVVDVLQVPAFLARQT
DLVVAIAQTGNAVNIKKPQFMSPTQVEHIVSKCREAGNDRVILCERGSSFGYDNLVVDML
GFRQMRDTTGDCPVIFDVTHSLQMRDPGGAASGGRRRQVLDLARAGMAVGLAGLFLEAHP
DPDRARCDGPSALPLALLDAFLQQVKAVDDLVKRLPPLDVR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaccctcaccccggatgtcaccgtcggcaacgacttgccgtttgtcctgttc
ggcggcctcaacgtgctcgaaagcctggacttcacgctcgacgtctgcgggacgttcgtc
gaggtcacgcgccgtctcggcattccgctggtgttcaaggcgtccttcgacaaggctaac
cgctcgtcgatccactcgtatcgcggcgtcggattcgacaaggggctgcggattttcgac
gcggtcaagcgccggttcggcgtgcccgtgatcaccgacgtgcatgaaacctggcaggcc
gggccggtgtcgcaggtcgtcgacgtgctgcaggtgccggcgttcctcgcgcgccagacg
gatctcgtggtcgcgatcgcgcagaccggcaacgcggtcaacatcaagaagccgcagttc
atgagtccgacgcaggtcgagcacatcgtgtcgaagtgccgcgaagccggcaacgaccgc
gtgatcctgtgcgagcgcggctcgtcgttcggttatgacaatctcgtcgtcgacatgctc
ggcttccgccagatgcgcgacacgacgggcgactgcccggtgatcttcgacgtcacgcac
agcctgcagatgcgcgatccgggcggtgctgcgtcgggtggccggcggcgccaggtgctc
gacctcgcgcgcgccgggatggcggtcgggctggccgggctgttcctcgaagcgcatccc
gaccccgaccgcgcgcgctgcgacggcccgagcgcgctgccgctcgcgctgctcgacgcg
ttcctgcagcaggtgaaggcggtggacgacctggtcaagcggctcccgccgctcgatgtc
cggtga
DBGET
integrated database retrieval system
