Burkholderia seminalis: WJ12_21345
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Entry
WJ12_21345 CDS
T04851
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
bsem
Burkholderia seminalis
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsem03009
]
WJ12_21345
Enzymes [BR:
bsem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
WJ12_21345
Ribosome biogenesis [BR:
bsem03009
]
Prokaryotic type
rRNA helicases
WJ12_21345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
AAA_22
P-loop_SecA
YjeF_N
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AOJ27502
LinkDB
All DBs
Position
2:complement(143078..144481)
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AA seq
467 aa
AA seq
DB search
MTQSMPTPFSALPLTPATLANLAQLGYVDMTPIQAASLPVALAGQDLIAQAKTGSGKTAA
FSLALLARLDARRFDVQAMILCPTRELADQVAQEVRRLARAEENVKVLTLCGGTPMRPQA
QSLEHGAHIVVGTPGRIMDHLDRGNLKLDALNTLVLDEADRMLDMGFFDDIAKVARMCPT
TRQTLLFSATYPDGIAKLSQQFLRNPKEIKLEERHDDSKIRQRFYEVTENERLHAVGQLL
NHYRPVSTIAFCNTKQQCRDLLDVLHAQGFHALALHGELDQRERDQVLIQFANRSCSVLV
ATDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRADQQGWALSLASMDEMGRVGAI
EQAQKRDVEWHPLAELKPADDSVLLPPMETLQILGGRKDKIRPGDVLGALTGDAGFDGKQ
IGKINVTEFSTYVAIERGVARDALRKLNAGKIKGKRVKVRLMDEDDA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacccaatcgatgcccacgcccttcagcgcgctgccactgacgcccgccacgctcgcg
aacctcgcgcagctcggctatgtcgacatgacgccgatccaggccgcgagcctgccggtc
gcgctggccggccaggacctgatcgcccaggcgaagacggggagcggcaagaccgccgcg
ttctcgctcgcgctgctcgcgcgcctcgacgcgcgccgcttcgacgtgcaggcgatgatc
ctgtgcccgacgcgcgagctggccgaccaggtcgcgcaggaagtgcgccgcctcgcacgt
gccgaagaaaacgtgaaggtgctgacgctgtgcggcggcacgccgatgcgcccgcaggcg
caaagcctcgaacacggcgcgcacatcgtcgtcggcacgcccggccgcatcatggatcac
ctcgaccgcggcaacctgaagctcgacgcgctgaacacgctggtgctcgacgaagccgac
cggatgctcgacatgggcttcttcgacgacatcgcgaaggtcgcgcggatgtgcccgacc
acgcgccagacgctgctgttctccgcgacctatccggacggcatcgcgaagctgagccag
cagttcctgcgcaacccgaaggaaatcaagctcgaggagcgccacgacgacagcaaaatc
cgccagcgtttctacgaggtgaccgagaacgagcggctgcacgcggtgggccagctgctg
aaccactaccggccggtgagcacgatcgcgttctgcaatacgaagcagcagtgccgcgac
ctgctcgacgtgctgcatgcgcagggtttccacgcgctggcgctgcacggcgagctcgac
cagcgtgagcgcgaccaggtgctgatccagttcgcgaaccgcagctgctcggtgctggtg
gcgaccgacgtcgccgcgcgcgggctcgacatcgcgcagctcgaagccgtgatcaacgtc
gacgtgacgcccgaccccgaagtgcatgtgcaccgcatcggccgcaccggccgcgcggat
cagcaaggctgggcgctgagcctcgcgagcatggacgagatgggccgcgtcggcgcgatc
gaacaggcgcagaagcgcgacgtcgaatggcatccgctcgcggaactgaagccggcggac
gacagcgtgctgctgccgccgatggaaacgctgcagatcctcggcgggcgcaaggacaag
atccgcccgggcgacgtgctcggcgcgctgaccggcgacgccgggttcgacggcaagcag
atcggcaagatcaacgtgaccgagttctcgacctatgtcgcgatcgagcgcggcgtcgcg
cgcgacgcgttgcgcaagctcaatgcggggaagatcaagggcaagcgggtcaaggtccgg
ttgatggacgaagacgacgcatga
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