Burkholderia seminalis: WJ12_22415
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Entry
WJ12_22415 CDS
T04851
Name
(GenBank) adenosine deaminase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bsem
Burkholderia seminalis
Pathway
bsem03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WJ12_22415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bsem03000
]
WJ12_22415
03400 DNA repair and recombination proteins [BR:
bsem03400
]
WJ12_22415
Enzymes [BR:
bsem01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
WJ12_22415
Transcription factors [BR:
bsem03000
]
Prokaryotic type
Helix-turn-helix
AraC family
WJ12_22415
DNA repair and recombination proteins [BR:
bsem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
WJ12_22415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AOJ27693
LinkDB
All DBs
Position
2:complement(387613..389085)
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AA seq
490 aa
AA seq
DB search
MGYSRPMRLDPDTCYDALLARNRRFDGWFFVGVATTGVYCRPVCPVKPPKARNCSYYPTA
AAAEKAGFRPCMRCRPELAPGHGLLDLSGNLADAAATLIEDGFLNAHGVDALAQRVGVTE
RHLRRIFGAQFGVSPVEFAQTHRLLMAKRLLTDTALPLAVVASTAGFGSVRRFNDLFRQR
YGLNPLRLRKGAGAAAGDMTFPLPYRPPFAWDELMRFLAQRQIDGVERIDARGYARAVAM
PNRNDGGRVTGWLSVAHVPQRFALAVTVSPALTPVVPAVLARVRRLFDLDSRPDVIDAHL
GELAHGSPGLRVPGAFDGLEIAIRAIAGEQLAAADACTGTPVPARLAERFGASVEGAPPG
LAHALPCAATLAALPPAALETIGIPRETARAIVSLARAVDDGTLALEPMAPLDATLAALR
AMPGFDERAVQYVAMRAMAWPNAFPADDTWLPARNERATLPSSAPHAARWAPWRAYAALH
VWRLQGDAAR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgggttacagtcgccccatgcgcctcgatcccgatacctgctacgacgccctgcttgcg
cggaaccgccgcttcgacggctggttcttcgtcggcgtggcgacgaccggggtgtactgc
cgccccgtctgcccggtgaagccgccgaaggcgcggaactgcagctactacccgaccgcc
gccgcggccgagaaagccgggttccggccctgcatgcgctgccgccccgagctcgcgccc
ggccacgggctgctcgacctgtccggcaatctcgccgacgcggccgcgacgctgatcgag
gacggtttcctgaacgcgcacggcgtcgacgcgctcgcgcagcgcgtcggcgtgaccgag
cggcatctgcgacggatcttcggcgcgcagttcggcgtgtcgccggtcgagttcgcgcag
acgcaccgcctgctgatggccaagcggctgctgaccgacaccgcgctgccgctggccgtc
gtcgcgtcgacggccggattcggcagcgtgcgacgcttcaacgacctgttccgccaacgc
tacggcctcaacccgctgcggctgcgcaagggcgccggtgccgccgccggcgacatgacg
ttcccgctgccgtaccggccgccgttcgcgtgggacgagctgatgcgttttctcgcccag
cggcagatcgacggcgtcgagcggatcgatgcacggggttatgcgcgcgccgtcgccatg
ccgaaccggaacgacggcggccgcgtgacgggctggctgtccgtcgcacacgtgccgcag
cgcttcgcgctggccgtcaccgtgtcgcccgcgctgacgccggtcgtcccggccgtgctc
gcgcgcgtgcggcggctgttcgatctcgacagccggcccgacgtgatcgacgcgcatctc
ggcgagctcgcgcacggctcgccgggcctgcgcgtgcccggcgcgttcgacggcctcgag
atcgcgatccgcgcgattgcgggcgagcagcttgcggcggcggatgcgtgtacgggtacg
cccgtgccggcacgcctcgcagaacgtttcggcgcgtcggtcgaaggtgcgccgccgggc
ctcgcgcatgcgctgccgtgcgccgcgacgctggccgccctgccgcctgcggccctcgaa
acgatcggcatcccgcgcgagacggcgcgcgccatcgtgtcgctcgcgcgcgcggtcgac
gacggcacactcgcgctcgaaccgatggcgccgctcgacgcgacgctcgccgcgttgcgc
gcgatgcccggcttcgacgaacgcgcggtgcagtacgtcgcgatgcgtgcgatggcctgg
ccgaatgcgttccccgcggacgatacgtggcttcccgcccgcaacgaacgcgcgaccctg
ccatcatccgcgccgcatgcggcgcgctgggcgccgtggcgcgcgtatgccgcactgcat
gtgtggcgcctccaaggagatgcagcgcgatga
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