Burkholderia seminalis: WJ12_23260
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Entry
WJ12_23260 CDS
T04851
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
bsem
Burkholderia seminalis
Pathway
bsem02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WJ12_23260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsem02000
]
WJ12_23260
Transporters [BR:
bsem02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
WJ12_23260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
AOJ27845
LinkDB
All DBs
Position
2:complement(570474..571520)
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AA seq
348 aa
AA seq
DB search
MKLLGTIAAAAALCLAGAGAPAFAQTKTIYVGMNGGPMEKAYTSQVLPDFEKANNVKVVV
VPGTSSDVLAKLLANRNKPQIHVAFLDDGVMARAVSLGVCQKLDDSPVLKELYPFARMKD
DVGAGVQLGMTGIAYNRKLFTEKGWAPPTSWMDFADPKYKGKVVFQSASSSTFGLHGFLA
INRLLGGNEQNVEPGFSKWASTVGPNVVEYIPNSAKISEMVQTGEAGLFPLTPTGVGDLQ
DKGIPVAYANPKEGPVLLLVDLCVVANNPDPQLAQKLAQFLLSAPAQTKAAEAGKQIPTN
RLAKMPAAMQQSLGNVDDLVRKVTVVDWAAINARRAQWDTRWNRQIER
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgctcggaacgatcgcggcggccgccgccctctgcctcgcgggcgccggcgcg
cccgcgttcgcgcaaacgaagacgatctacgtcggcatgaacggcgggccgatggagaag
gcctatacgagccaggtgctgcccgacttcgagaaagcgaacaacgtgaaggtggtcgtc
gtgcccggcacgtcgtcggacgtgctcgcgaagctgctcgcgaaccgcaacaaaccgcag
atccacgtcgcgttcctcgacgacggcgtgatggcgcgcgcggtcagcctcggcgtgtgc
cagaagctcgacgattcgccggtgctgaaggagctgtatccgttcgcgcggatgaaggac
gacgtcggcgcgggcgtgcagctcggaatgaccggcatcgcgtacaaccggaaactgttc
acggagaaaggctgggcgccgccgacgtcgtggatggacttcgccgacccgaaatacaag
ggcaaggtcgtgttccagtcggcgtcgagcagcacgttcgggctgcacggcttcctcgcg
atcaaccggctgctgggcggcaacgagcagaacgtcgagcccggcttcagcaagtgggcg
agcacggtcgggccgaacgtcgtcgagtacatcccgaactcggcgaagatctccgagatg
gtgcagaccggcgaagccggcttgttcccgctcacgccgaccggcgtcggcgacctgcag
gacaagggcattcccgtcgcgtacgcgaacccgaaggaaggccccgtgctgctgctcgtc
gacctgtgcgtggtcgcgaacaaccccgatccgcagctcgcgcagaagctcgcgcagttc
ctgctgtccgcgcccgcgcagacgaaggcggccgaggccggcaagcagatcccgaccaac
cgcctcgcgaagatgcctgccgcgatgcagcagagcctcggcaacgtcgacgatctcgtg
cgcaaggtgacggtggtcgactgggccgcgatcaacgcgcgccgcgcgcagtgggatacg
cgctggaaccggcagatcgagcggtaa
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