Burkholderia seminalis: WJ12_25220
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Entry
WJ12_25220 CDS
T04851
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bsem
Burkholderia seminalis
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsem03016
]
WJ12_25220
Enzymes [BR:
bsem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
WJ12_25220
Transfer RNA biogenesis [BR:
bsem03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
WJ12_25220
Prokaryotic type
WJ12_25220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF7024
Motif
Other DBs
NCBI-ProteinID:
AOJ28192
LinkDB
All DBs
Position
2:985964..986776
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AA seq
270 aa
AA seq
DB search
MRIALGIQYDGAAFCGWQAQPHGKTVQDRLEHALAEFARVPLHTTVAGRTDTGVHGLGQV
VHFDTELEREVFSWVRGTNAFLPPTVSVQWAKPMPDTFHARFSAFERTYYYALYVHPVRS
PMLAGRAGWIHTPLDDDAMRAAAAHLIGEHDFSSFRSSECQSKTPVKHLYQIDVRRAGHF
IHFRFRANAFLHHMVRNLMGCLVAVGRGRYPADWLADVLAGRDRNLAAPTFMADGLYLAH
VGYPAEFAVPPAQLGSVPWSSVWADLDPQS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcgcactgggcatccagtacgacggcgcggcgttctgcggctggcaggcgcag
ccgcacggcaagaccgtgcaggaccggctcgagcacgcgctggccgagttcgcgcgggtg
ccgctgcatacgacggtcgctggccggaccgacaccggcgtgcacgggctcgggcaggtc
gtgcacttcgacaccgagctcgaacgcgaggtgttctcgtgggtgcgcggcaccaacgcg
ttcctgccgccgaccgtatcggtgcaatgggcgaagccgatgccggacacgttccacgcg
cgtttctcggcgttcgagcgcacctattactacgcgctgtacgtgcatcccgtgcgctcg
ccgatgctggccgggcgtgcgggctggatccacacgccgctcgacgacgacgcgatgcgc
gccgccgccgcgcacctgatcggcgagcacgatttttcgtcgttccggtcgtcggaatgc
cagtcgaagacgccggtcaaacacctgtatcagatcgacgtgcggcgcgcggggcatttc
atccatttccgcttccgcgcgaacgcgttcctgcatcacatggtgcgcaacctgatgggc
tgcctcgtcgcggtcgggcgcggccgctatccggccgactggctcgccgacgtgctggcc
gggcgcgatcgcaacctggcggcgcccacgttcatggccgacgggctgtatctggcccac
gtcggctacccggcggaattcgccgtcccgcccgcgcagctcggcagcgtgccgtggagc
agcgtctgggccgatctggaccctcaatcatga
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