Burkholderia seminalis: WJ12_26035
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Entry
WJ12_26035 CDS
T04851
Name
(GenBank) transcriptional regulator
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
bsem
Burkholderia seminalis
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bsem03000
]
WJ12_26035
Transcription factors [BR:
bsem03000
]
Prokaryotic type
Helix-turn-helix
IclR family
WJ12_26035
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_24
MarR
HTH_5
HTH_29
TrmB
HTH_Crp_2
HTH_23
HTH_AsnC-type
HTH_11
DUF7342
MksE
TFIIE_alpha
Rrf2
HTH_27
HTH_20
DUF7343
HTH_Cmi2_C
DUF4423
HTH_65
Dimerisation
DUF977
wHTH-PRTase_assc
Put_DNA-bind_N
HTH_28
AbiEi_4
HTH_17
HTH_9
RepL
HTH_36
FaeA
SMC_Nse1
HTH_45
DUF2250
Motif
Other DBs
NCBI-ProteinID:
AOJ28345
LinkDB
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Position
2:complement(1183435..1184247)
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AA seq
270 aa
AA seq
DB search
MTTYTNVRGLARGLQVLRTLNAMEDGRATSQQIADLTGLHRTTVRRLLETLMDEGFVRRS
TSDDSFRLTLAVRSLSEGFTDTERIATVAPPIMGQLLQRVAWPSDLTTPDGDAMIIRETT
HRFSRLSFHRSMVGRRLPILLTAAGRAYFAMCPDEEREDILELLRSGAGGEEQQAFAKND
ALVRKLIRRVREDGFGSNHGDWTAQAKIGAVAVAISADERVIASLNVVFLSRAVSLQDAT
RRYVPELQKAAADIAEALRQEPAARSRAST
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacctacacgaacgtgcgcggactggcgcgcggcctccaggtgctgcggacgctg
aatgcgatggaagacgggcgtgcaacgagccagcagatcgccgatctgaccggcctgcat
cgcaccacggtgcgccgcctgctcgaaaccttgatggacgaaggattcgtgcgccgcagc
acgtcggacgacagtttccgcctgacgctcgccgtacgttccttgagcgagggcttcacc
gataccgagcgcatcgccaccgtggcgccgccgatcatggggcagctcctgcagcgcgtc
gcgtggccatccgatctgaccacacccgacggcgacgcaatgatcatccgcgagacgaca
catcgcttcagccggctgtcgtttcatcgctcgatggtcgggcggcgtttgcctatcttg
ctgaccgcggctggccgtgcctacttcgcgatgtgccccgacgaggagcgcgaggatatt
ctggaactgttgcgctccggtgccggcggtgaagagcaacaggcgttcgcgaaaaacgat
gcgctcgtgcgcaagctgatccgacgggtgcgcgaggacggtttcggatcgaatcacggc
gactggaccgcgcaggcgaaaatcggtgcggtggcggtcgcgatcagcgcggacgaacgc
gtgatcgccagcctcaatgtcgtcttcctgtcacgcgccgtcagtctccaggatgccact
cgccgctatgtgcccgagctgcaaaaagcagcagcggatattgccgaagcattgcgacag
gaacccgcggctcgttcccgcgcatcaacgtag
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