Burkholderia seminalis: WJ12_27890
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Entry
WJ12_27890 CDS
T04851
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
bsem
Burkholderia seminalis
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsem02000
]
WJ12_27890
Transporters [BR:
bsem02000
]
Other transporters
Pores ion channels [TC:
1
]
WJ12_27890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
NtrZ
Motif
Other DBs
NCBI-ProteinID:
AOJ28673
LinkDB
All DBs
Position
2:1610066..1612093
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AA seq
675 aa
AA seq
DB search
MVFAAVAHAQTDAPASSGTPAAAPLAPIFVTANPLGDTELIAPTVQLSGDALTRRQADSL
GETLNGLPGVSTTTYGPMVGRPIIRGMDGDRIRLLQNGVAAYDASSLSYDHAVPQDPLSI
ERVEIVRGPAALLYGGNAVGGVVNTIDNRIPREAIQGVTGALDARYGGANSVRAGAAQVE
GGNGRFAFHVDAFDRETSKLRIPGYARSSQQRAIDGPDTPQPEGSVPNSDGRVHGGAVGA
SYTWADGFAGLSYSGYESNYGSVAESDVRLRMRQERLALASEVRNLSGPFTKLKFDFAYT
DYRHKEVDNGETATTFRNRGYEARIEARHRKIGPFEGAIGVQFGQNTFSALGDEMLVPST
RTNSVALFGLEEWQVVPALKLSLGGRFEHVKVDPDPAGVEKFAGAQPRDFNAGSLSAGAL
FSLTPVWSVAANVAYTERAPTFYELYSNGPHDATGQFLIGNPNASKEKAVSTDLSLRYAS
GPNRGSVGVFYNRFSNYLTEYNTGRVVDDDGDPVAPGTDGSLNEAIYRGVRAEFYGVELD
GKWRAFSRRGHTVDLELTADYTHARNVDTGQPLPRIAPLRATLAADYGYGPFGARAQVTH
AWSQHRVPDNDFSTDGYTSLGVMLTYKFRVGPTHWLAYLRGDNLTNQDIRYSTSVVRGFA
PEGGRSVMAGLCTTF
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgccgccgtcgcccacgcgcagaccgatgcgcccgcctcgtccggcacgccc
gcggccgccccgctcgcgccgatcttcgtgaccgcgaacccgctcggcgacaccgaactg
atcgcgcccaccgtccagctttccggcgatgcgctgacgcgccgccaggccgattcgctc
ggcgaaacgctcaacgggctgcccggcgtgtcgaccacgacttacggcccgatggtcggc
cgcccgatcatccgcgggatggacggcgaccggatccggctgctgcagaacggcgtcgcg
gcctacgatgcgtcgtcgctgtcgtacgaccatgcggtgccgcaggatccgctgtcgatc
gaacgcgtcgaaatcgtgcgcggcccggccgcgctcctgtacggcggcaacgcggtgggc
ggcgtcgtcaacacgatcgacaaccgcattccgcgcgaagcgatccagggcgtgacgggt
gcgctcgacgcgcgctacggcggcgcgaattccgtgcgcgcgggcgccgcgcaagtcgaa
ggcggcaacggccgcttcgcgttccacgtcgacgcgttcgaccgagaaaccagcaagctg
cggattcccggctacgcgcgcagcagccagcaacgcgcgatcgacggccccgacacgccg
cagccggaaggcagcgtgccgaacagcgacggacgcgtgcacggcggcgcggtcggcgcg
tcgtacacgtgggccgacggcttcgcgggcctgtcctatagcggctacgaatcgaactac
ggttccgtcgcggaaagcgacgtgcggctgcgcatgcgccaggaacgcctggcgctcgca
tccgaggtgcgcaacctgagcgggccgtttacgaagctgaagttcgatttcgcgtacacc
gactatcgccacaaggaagtcgacaacggcgagacggcgaccaccttccgcaatcgcggc
tacgaggcgcgcatcgaggcgcggcatcgcaagatcggcccgttcgaaggcgcgatcggc
gtgcagttcggccagaacacgttctccgcgctcggcgacgaaatgctcgtgccgtccacg
cgcaccaacagcgtcgcgctgttcggcctcgaggaatggcaggtcgtccccgcgctgaag
ctgagcctcggcgggcgcttcgagcacgtgaaggtcgatcccgatccggccggcgtcgag
aaattcgcgggcgcgcaaccgcgcgacttcaacgcgggcagcctgtccgccggcgcgctg
ttctcgctgacgccggtatggtcggtcgcggccaacgtcgcgtacaccgaacgcgcgccg
accttctacgagctgtattcgaacggcccgcacgatgcgaccggccagttcctgatcggc
aacccgaatgcgtcgaaggaaaaagccgtgtcgaccgacctgtcgctgcgctacgcgagc
ggcccgaaccgcggcagtgtcggcgtgttctacaaccgcttctcgaactacctgaccgag
tacaacaccggccgcgtcgtggacgacgacggcgaccccgtcgcgcccggcaccgacggc
tcgctcaacgaggcgatctatcgcggcgtgcgcgccgagttctacggcgtcgagctggac
ggcaagtggcgcgcgttctcgcggcgcggccacacggtcgacctcgaactgacggccgac
tacacccacgcgcgcaacgtcgacacgggccagccgctgccgcgcatcgcaccgctgcgc
gcgacgctcgcggccgactacggctacgggccgttcggcgcgcgcgcgcaggtcacgcac
gcgtggtcgcagcatcgcgtgccggacaacgatttttcgacggacggctatacctcgctc
ggcgtgatgctgacctacaagttccgcgtcggcccgacgcactggctcgcgtacctgcgc
ggcgacaacctgacgaaccaggacatccgctattcgacgtcggtcgtgcgcggcttcgcg
cccgaaggcgggcgcagcgtgatggccggattgtgcaccacgttctga
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