Burkholderia seminalis: WJ12_28250
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Entry
WJ12_28250 CDS
T04851
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
bsem
Burkholderia seminalis
Pathway
bsem02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WJ12_28250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsem02000
]
WJ12_28250
Transporters [BR:
bsem02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
WJ12_28250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AOJ29911
LinkDB
All DBs
Position
2:complement(1688140..1689270)
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AA seq
376 aa
AA seq
DB search
MQPGDSRGVRLIRGIGARKRARGAVRSLLIILTIGFLAPVVPAFSASPETVNDNVLRVLA
WPGYADSDIVGAFEAQFRARVEVTFVDSDEALWSRMHSASPPPYDVLAANTAEIQRYARE
RLLAPIDLQRIPNRRRQLPNFQQVATIGGLVQDGTTYAIPFTYSSMGLIYDRKQVPAAPR
SMRELWNPRYRGKVLDFNSAQHNFSFAALALGYSDPFRLSSAQTLAVARKLIDLRRNLLT
YYTLPEEATALFVQHRAALMFGNYGTQQVELLRRAGADVGYVIPEEGALAWLDCWAVTRG
AQRPGLAFAWINYMLEPAIGALLTERQGLANTLEPPSGLDTGHQHLVWLQPVENIARRES
LWSRIVSGDRPERFGK
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgggcgattcacgcggggtccgattgatcaggggaatcggtgcacgcaagcgt
gcacgcggcgccgtgcgcagcctgctcatcatattgacgataggctttctggcacccgtc
gtgccggcgttctccgcctctcccgaaaccgtcaacgacaacgtgctgcgcgtgctcgcg
tggcccggctatgcggacagcgacatcgtcggcgcgttcgaggcgcagtttcgcgcgcgc
gtcgaagtgacgttcgtcgactccgacgaagcgttgtggtcgcggatgcacagcgcgtcg
ccgccgccgtacgacgtgctggccgcgaatacggccgagatccagcgttatgcgcgcgaa
cgcctgctcgcgccgatcgacctgcagcgcattccgaaccggcggcgccagttgccgaac
ttccagcaggtcgcgacgatcggcgggctcgtgcaggacggcacgacctacgcgatcccg
ttcacgtattcgtcgatggggctgatctacgaccgcaagcaggtgccggccgcgccgcgc
tcgatgcgcgagctgtggaatccgcgctaccgcggcaaggtgctcgacttcaacagcgcg
cagcacaatttctcgttcgccgcgctcgcgctcggctattccgatccgttccggctgtcg
tccgcgcagacgctcgcggtcgcgcgcaagctgatcgacctgcgccgcaacctgctgacg
tattacacgctgcccgaggaggcgaccgcgctgttcgtccagcatcgcgcggcactgatg
ttcggcaactacggcacgcagcaggtcgaactgctgcggcgcgcgggcgcggacgtcggc
tacgtgatcccggaagaaggcgcgctcgcgtggctcgattgctgggccgtcacgcgcggc
gcgcaacgccccgggttggcattcgcgtggatcaactacatgctcgaaccggcgatcggc
gcgctgctgaccgagcgccaggggctcgcgaatacgctcgagccgccgtcggggctcgac
accgggcaccagcatctcgtgtggctccagcccgtcgagaacatcgcccgccgcgaatcg
ttgtggagccgtatcgtgtcgggcgaccggccggagcggttcggaaaatga
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