KEGG   Burkholderia seminalis: WJ12_29000
Entry
WJ12_29000        CDS       T04851                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bsem  Burkholderia seminalis
Pathway
bsem02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bsem00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    WJ12_29000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bsem03021]
    WJ12_29000
Transcription machinery [BR:bsem03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     WJ12_29000
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 HTH_23 HTH_11 HTH_24 PhyR_sigma-like HTH_3 Sigma70_ECF HTH_28 MerR HTH_Mga Phage_terminase HTH_29 HTH_AsnC-type HTH_VMAP-M9
Other DBs
NCBI-ProteinID: AOJ28869
LinkDB
Position
2:complement(1872523..1873074)
AA seq 183 aa
MSTGPAAQPLDKLERSDDESARSRSVWLANEFRASYGWLKAKLLRRVGSPADAEDLASSS
FEALAGVDDPPGIREPRAWLTVIAQRLTFEMWRRRDLERAYHEALLNAEEPLAPSAESIV
EISQALFLIDQALDGLPPKARSAFIYSQIDGLTYSEIAARLGVSTSMVRKYIAQALTRCF
LIS
NT seq 552 nt   +upstreamnt  +downstreamnt
atgagcactggcccggcagcacagcctctcgacaaactggaaaggagcgacgacgagtcg
gctcgttcccgctcggtttggcttgccaacgagtttcgggccagctatggatggttgaag
gcgaagctgctgcggcgtgtcggatcgccggccgatgccgaggatctggcgtcgtcgtcg
ttcgaggcgcttgccggcgtcgatgacccgccaggtattcgcgagcctcgagcgtggctg
accgtcatcgcccagcgtctcaccttcgagatgtggcgccgccgggatctcgagcgcgcg
tatcatgaggcgctcctcaatgccgaggaacccctcgcgccgtccgccgaatcgatcgtc
gagatttcccaggcattgttcctgatcgatcaggcgctcgatggattgcctccgaaagcg
agaagtgcctttatctacagccagatcgacggcctcacttattccgagattgccgctcga
ctcggcgtttcgacaagcatggttcgcaaatacatcgcccaggcgcttacccgatgcttt
ctgatcagttga

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