Burkholderia seminalis: WJ12_30445
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Entry
WJ12_30445 CDS
T04851
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bsem
Burkholderia seminalis
Pathway
bsem00300
Lysine biosynthesis
bsem00470
D-Amino acid metabolism
bsem01100
Metabolic pathways
bsem01110
Biosynthesis of secondary metabolites
bsem01120
Microbial metabolism in diverse environments
bsem01230
Biosynthesis of amino acids
Module
bsem_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
WJ12_30445
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
WJ12_30445
Enzymes [BR:
bsem01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
WJ12_30445
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AOJ29126
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All DBs
Position
2:2210506..2211744
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AA seq
412 aa
AA seq
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MSLDSRQLATLAQQYGTPLWVYDADLIRDRIAQLRQFDVIRYAQKANSNVHILKLMREEG
ACVDAVSLGEIERSLAAGFSPAGEPEGVVFTADLIDRPTLAAVLKHGVTVNAGSLDMLAR
IGEHAPGHRVWLRVNPGFGHGHSNKTNTGGPQSKHGIWIDDVPRAIEIVRQYGLKLVGIH
MHIGSGVDYGHLSQVCDAMVDLVTSLGHDIDAISAGGGLSIPYRDGEPRVDVGHYFSQWD
AARKRIERHLGHPVRIEIEPGRFLVAEAGTLVTEVQAVNRRPKHDFVLIDAGFNDLMRPS
MYGSYHAVSVHAHDGTLPAGRPAVDLAIAGPLCESGDVFTQDTGGVVTHRKLPQPQIGDL
LFLHDAGAYGASMSSNYNSRPLAPEVLVDHGTPRLIRRRQTIEELLALETFE
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcgattcccgccagctcgcgacgctcgcgcagcaatacggcaccccgctgtgg
gtgtacgacgccgacctcatccgcgaccgcattgcccaactgcgccagttcgacgtgatc
cgctacgcgcagaaggcgaactcgaacgtccatatcttgaagctgatgcgcgaggaaggc
gcgtgcgtcgacgccgtgtcgctcggcgagatcgaacgcagcctcgcggcgggcttcagc
ccggccggcgaaccggaaggcgtcgtgttcacggccgacctgatcgaccgcccgacgctc
gcggccgtgctcaagcacggcgtaaccgtcaacgccggctcgctcgacatgctcgcgcgc
atcggcgagcacgcgccgggccaccgcgtgtggctgcgcgtcaatcccggcttcggccac
ggccacagcaacaagaccaacaccggcggcccgcagagcaagcacggcatctggatcgac
gacgtgccgcgcgcgatcgagatcgtgcgccagtacgggctgaagctcgtcggcatccac
atgcacatcggctcgggtgtcgactacggccacctgtcgcaggtgtgcgatgcgatggtc
gatctcgtcacgtcgctcggccacgacatcgacgcgatctcggccggcggcggcctgtcg
atcccgtatcgcgacggcgaaccgcgcgtcgacgtcggtcactacttcagccagtgggac
gccgcccgcaagcggatcgagcggcacctcggccacccggtgcgcatcgagatcgaaccg
ggccgcttcctcgtcgcggaagccggcacgctcgtcaccgaagtgcaggccgtgaaccgc
cggccgaagcacgatttcgtgctgatcgacgcgggcttcaacgacctgatgcggccgtcg
atgtacggcagctatcacgcggtgtccgtgcacgcgcacgacggcacgctgccggccggc
cgcccggccgtcgatctggcgatcgcgggcccgctgtgcgaatccggcgacgtgttcacg
caggacacgggcggcgtggtcacgcaccgcaagctgccgcagccgcagatcggcgacctg
ctgttcctgcacgatgcgggcgcatacggcgcgtcgatgtcctcgaactacaacagccgg
ccgctcgcgccggaagtgctcgtcgatcacggcacgccgcggctgatccggcgccggcaa
acgatcgaggaactgctcgcactcgagacgttcgaataa
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