Burkholderia seminalis: WJ12_33645
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Entry
WJ12_33645 CDS
T04851
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bsem
Burkholderia seminalis
Pathway
bsem00300
Lysine biosynthesis
bsem00470
D-Amino acid metabolism
bsem01100
Metabolic pathways
bsem01110
Biosynthesis of secondary metabolites
bsem01120
Microbial metabolism in diverse environments
bsem01230
Biosynthesis of amino acids
Module
bsem_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
WJ12_33645
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
WJ12_33645
Enzymes [BR:
bsem01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
WJ12_33645
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
AOJ29693
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All DBs
Position
2:2953178..2953987
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AA seq
269 aa
AA seq
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MPIRFQKMNANGDDFVIVDLRGQDRDRVPRLDRDLVRRMGDRHSGIGFNQLAVVTDCDDA
AAQVAFWNPDGSTLDTCGSATRGVAWQLMRETGAASIVLRTNRGPLQCAYDAHGSIKVEM
GVPRVGWRDVPVAEAVDTLTLPLPGAPAACSMGNPHCTFFVDDVDAVDLEALGPAIETHP
LFPRKTNVHVVQVIDRSHIRLRIWERGGGVPLGSGSCSCGAAVNGIRRGLLDDTVRVTCD
GGDVAVQWDGAGSVFLSGPVTFGFSGVWL
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccgatccgatttcagaagatgaacgcaaacggcgatgacttcgtcatcgtcgacctg
cgcggtcaggatcgggatcgcgtgccccgcctcgatcgcgacctcgtgcggcgcatgggc
gaccggcacagcggcatcggcttcaaccagctcgcggtggtgacggactgcgacgacgcg
gccgcacaggtcgcgttctggaatcccgacggctcgacgctcgatacctgcggcagcgcg
acacgcggcgtcgcgtggcagctgatgcgggaaaccggcgcggcgtcgatcgtgctgcgc
acgaatcgcgggcccctgcagtgtgcgtacgacgcgcacgggtcgatcaaggtcgagatg
ggcgtgccgcgcgtcggctggcgggacgtgcccgtcgccgaagccgtcgatacgctcacg
ctgccgttgcccggcgcgccggccgcgtgcagcatgggcaatccgcactgcacgttcttc
gtcgacgacgtcgatgcggtcgacctcgaagcgctcggtccggccatcgaaacgcatccg
ctgtttccgcggaaaaccaacgtgcacgtcgtacaggtcatcgaccgttcgcacattcgt
cttcgcatctgggagcgcggcggcggcgtgccgctcgggtccggctcgtgttcgtgcggc
gcggcggtcaacggcatccggcgcgggctgctcgacgataccgtgcgggtgacgtgcgac
ggcggcgacgtcgccgttcaatgggacggcgccggcagcgtgttcctgagcgggcccgtc
acgttcgggttcagcggggtgtggctgtga
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