Brasilonema sennae: DP114_17315
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Entry
DP114_17315 CDS
T10102
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bsen Brasilonema sennae
Pathway
bsen03410
Base excision repair
bsen03430
Mismatch repair
bsen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DP114_17315
03430 Mismatch repair
DP114_17315
03440 Homologous recombination
DP114_17315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsen03400
]
DP114_17315
DNA repair and recombination proteins [BR:
bsen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DP114_17315
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DP114_17315
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DP114_17315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF4168
Motif
Other DBs
NCBI-ProteinID:
QDL12292
UniProt:
A0A856MP35
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All DBs
Position
4023312..4025381
Genome browser
AA seq
689 aa
AA seq
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MGQTTSLSPLINQLLINRGIETPEQAQVFLNSGNLILPSPLEDFPDLGMSLELLHNAIAS
GEKIAICGDYDADGMTSTALLLRSLRWLGAQVDYAIPSRMHEGYGINKRIVEEFHSEGVG
LILTVDNGISAFEPIARARELGLKVIITDHHDIPQQLPPAHAILNPKLIRESSPYRGIAG
VGVAYILAVSLAQKLGQANDDILTSMLELFTLGTIADLAPLTGVNRHWVKSGLQHLPKSK
LPGVLALIQMSGVQLSPGQADESIQNSKLCPPDTLRERLSSASTSSGAETSKFKIQNSKS
LKPEDIGFRLGPRINAIGRIADPQIIIELLTTDDMGIALEKAMQCEAINRQRQEMCQEIE
NQAREIVEIEYLASLQQDRVLVIVKSDWHHGVIGIVASRLVERYGVPVFIGTYEDEGHIR
GSARGIPEFHVFDALEYSQDLLGKFGGHKAAGGFSLPSQNLEALRSRLSEFANQCLEPQH
LKPLLKIDTSALLNQIHHQFYQQLNVLEPCGIDNPDPVFWTSNVRVTEQQIVGKGHIKLT
ITQTIDDSEYKIKAIAWRWREYFPLPPRLDIAYKLRENHFNGNTTIELELLGVRLPTQSH
IFFAAQSAPLRTTFEYNQQHYTCGIYKNGSVPELRIQNPDGKILAVPLGHSIGLLGSSRQ
ESVEVDVSQPQYNQIFQTALQALSVLSNE
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggggcaaacaaccagtttatcgcccttaatcaaccaattgctgataaatcgaggtatt
gaaacaccagaacaagcacaagtttttttaaattcaggaaacctgatattaccttcgcct
ttggaagactttcctgatttgggaatgagtctggagttattgcacaatgcaatcgcctct
ggtgaaaaaatcgccatctgcggtgactacgatgctgacggaatgacaagcactgcttta
cttttgcgtagtctccgttggttgggtgctcaagtcgattatgctatccccagtcgaatg
catgaaggctacggtatcaataaacgcattgttgaagaattccacagcgaaggcgtagga
ttaattctgactgtagacaatggcatctcagcttttgaaccaattgccagagccagagaa
cttggtctaaaagttattatcaccgaccatcatgatatccctcaacaattacccccagcc
cacgccattctcaatcccaaactaatacgagaatcttctccttaccgaggtattgctggt
gttggtgtcgcctacattttggctgtgtcccttgctcaaaaattgggacaagctaatgat
gacattttaacttcgatgctggaactgtttacattaggaacgatcgcagatctcgctccc
ctaacgggtgtaaaccgtcactgggtaaaaagcggtttgcagcacttacctaaatccaaa
ctacctggagtgctagctttgattcagatgtctggggtgcagttgagtccaggacaagcg
gacgagtcaattcaaaattcaaagctatgtcctccggacacgctacgcgaacgacttagc
tcagctagtacgtcgagcggagccgagacgtcaaaattcaagattcaaaattcaaaatcg
ctaaagccggaagatataggctttcgcttgggaccgcgaatcaatgcaattggtcgtatt
gctgatccacaaattataatcgagttgctgacgactgacgatatggggatagcgctggaa
aaggcgatgcagtgcgaagcaattaaccgccagcgccaggaaatgtgccaggaaattgag
aatcaggcaagagaaattgtagaaatagaatatctcgcttctctacagcaagaccgcgtg
ttggttattgtaaaatctgactggcatcacggtgtaattggtatcgttgcttctcgcttg
gtggaacgctacggtgtgccggtgtttattgggacatacgaggatgaggggcacattcgc
ggttcagcgcgtggaattccagagttccatgtgtttgacgctttagaatattctcaggat
ttgctgggcaaatttggcggacacaaagctgctgggggcttttctttaccatcacagaat
ttagaagcgttgcgatcgcgtttgagtgagtttgctaatcagtgtctagaacctcagcac
ctgaaaccacttttgaaaattgacacatcggctttactcaatcaaattcatcatcagttt
tatcaacagcttaatgttttagagccgtgcggaatcgataacccagatcctgtattttgg
acatctaatgttcgagtgactgagcaacaaatagtgggcaagggtcatatcaagctgacc
ataacacaaactattgatgattcggaatacaaaattaaagcgatcgcctggcgctggcgt
gagtactttcctctaccgccgcgactggatatcgcttacaaactacgagaaaatcacttt
aatggcaacaccactatcgagttggagttacttggtgttaggcttccaacccagtctcac
atttttttcgctgcacagtcagcgcctttaagaaccacttttgagtacaatcaacagcac
tacacgtgtgggatttataaaaacggttctgtaccagaattgagaatccaaaatcctgac
ggcaaaattctagccgttccgctaggacacagcatcggtctactgggaagcagtcgtcaa
gagtctgtagaagttgatgtttctcaaccccaatacaaccagatttttcaaactgctctt
caagctttatcagtgctgagcaatgagtag
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