Brasilonema sennae: DP114_32125
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Entry
DP114_32125 CDS
T10102
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bsen Brasilonema sennae
Brite
KEGG Orthology (KO) [BR:
bsen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsen03009
]
DP114_32125
Enzymes [BR:
bsen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DP114_32125
Ribosome biogenesis [BR:
bsen03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DP114_32125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Methyltransf_15
TRM5-TYW2_MTfase
Cons_hypoth95
MTS
RrnaAD
PrmA
PCMT
Methyltransf_11
Methyltransf_4
DOT1
N6_N4_Mtase
MethyltransfD12
TPMT
Motif
Other DBs
NCBI-ProteinID:
QDL11932
UniProt:
A0A856MN52
LinkDB
All DBs
Position
complement(7633311..7634708)
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AA seq
465 aa
AA seq
DB search
MTKKTWKQGELIDVEIVDLNDAGDGVGRWEERIVFVSDTVPGDRAVVLLVHVKPNYAHAK
LKQLLKSSPYRIRPSCIVADKCGGCQWQHIDYPYQLLAKQNQVIQALERIGGFVQPPVDP
VLSTAECLGYRNKATYPVGLSANLTVQAGYYQKGSHQLINLNQCPVQDPRLNPLLLEVKQ
DIQKRGWQAYNEQRHTGVVRHLSLRIGRRTGEILLTLVVKDSNLDRIQDQALEWLKRYPQ
LVGVCLNRNPNRTNAIFGRETHCIAGRSYLREKFAGLEFQVRPDTFFQVNTETAEALLQV
IQSELNLQGSEVLLDTYCGIGTLTLPLAKQVKKAIGLELQPEAVEQAILNAKHNDISNVI
FQTGAVEKLLPEIEILPDIVLLDPPRKGCDRTVIETLLKSKPQRIVYVSCKVATLARDLK
LLCQNGVYSLTRVQPADFFGQTAHVEAAAFLVLSQLDKGTNSFTT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaaaacttggaaacaaggtgaattaattgacgttgagatagtggatttgaat
gatgcaggtgatggtgtagggcgttgggaagaaaggatcgtatttgtaagcgacactgta
ccaggcgatcgcgctgttgtcttgttggtacacgttaaacccaactacgctcacgctaaa
ctcaagcaacttctcaaatcatcgccctaccgcatccgacctagctgtatcgtggctgat
aaatgtggtggttgtcaatggcagcatattgattatccgtaccagttgctagcaaagcaa
aatcaagttatccaggctttggaacgtattggcggttttgtccaaccaccagtagatcca
gttctttcgactgctgaatgtttgggctaccgtaacaaagcgacttatcctgtgggatta
tctgccaatcttacggttcaagctggttactaccaaaaaggtagtcaccaattgattaac
ttgaaccaatgtcctgtacaagatcccagattaaatcctttgctgttggaagttaaacag
gacatccaaaagcgaggttggcaagcttacaacgaacagcgccacacaggtgttgtacgt
catcttagtttacgcattggtcgccgcacaggggaaatattactaactttggtggttaag
gactcgaatttagacagaattcaagaccaagccctggaatggttaaagcgttatccccag
ttagtgggggtttgtttgaaccgcaacccaaatcgtactaatgccatttttggacgggaa
actcattgcattgctgggcgttcttacttaagagaaaaatttgccggactagaattccaa
gtacgaccagatacttttttccaagtaaatacggagacagcagaagcattgttgcaggtc
attcaatcagaactcaatttacaaggttctgaggtgttacttgatacttattgtgggatt
gggacgttgacattgccacttgccaaacaagttaagaaagcaatcgggttagaattgcaa
cctgaggcagtagaacaagcaattttaaatgcaaagcataatgatatttcaaatgtcatt
tttcagactggggctgtggagaaattacttcctgagatagaaattttgccagacattgtt
ctgcttgatccaccacgtaagggatgcgatcgcactgtaattgaaactttactcaaatct
aaaccgcaacgtattgtttacgtcagttgtaaagtcgctacccttgctcgtgacctcaaa
ttactttgtcaaaacggggtatatagtctcacacgggtacaaccggctgatttttttggg
caaaccgctcatgtggaagctgctgcatttcttgttctatcacaattggacaaaggtact
aactcatttacaacttaa
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