KEGG   Brasilonema sennae: DP114_32495
Entry
DP114_32495       CDS       T10102                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bsen  Brasilonema sennae
Pathway
bsen03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bsen00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DP114_32495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bsen03019]
    DP114_32495
Messenger RNA biogenesis [BR:bsen03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DP114_32495
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: QDL11996
UniProt: A0A856MS33
LinkDB
Position
complement(7722169..7723941)
AA seq 590 aa
MAKNETLAALKIIPLGGLHEIGKNTCVFEYDDEIILLDAGLAFPTDGMHGVNIVLPDMTY
IRENRHKIKGMIVTHGHEDHIGGIAFHLKQFEIPAIYGPRLALAMLEGKLEEAGVRDRTE
LKTVLPRDVVRIGKHFFVEYIRNTHSIADSFTVAIHTPVGILIHTGDFKIDHTPVDGEHF
DLQRLAEHGEKGVLCLMSDSTNSEVPGFTPSERSVYPNLDRVFSQATGRLFVTTFASSVH
RINMVLQLAQKYKRVVGVVGRSMLNLIAHARNLGYIKCDENLLQPLQAVRNIPEEKVLIL
TTGSQGEPMSAMTRIANQEHPHIRIRQGDTVVFSANPIPGNTIAVVTVIDKLMMQGANVI
YGRDKGIHVSGHGCQEDQKLMIALTKPKFFLPVHGEHRMLVKHSQTAQSMGIPAENMVII
QNGNIVELTEESMRVAGKVASGLELVDTSGSGMVSAKVLQERQRMAEEGIVTIAMALDWN
GKLMAKPEIHLRGVVTSIERPLLQKWVQQRIEEILSVRWSEFAPSFDGENQQVDWGGLQG
LLERELARSLRKELHCQPSVTLLMQIPDEPPVKVSDGRRRRTRTAAQVAS
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggctaaaaacgaaactttagccgccctaaaaatcattccgttgggcggtttgcatgaa
attggtaaaaatacctgtgtttttgagtatgacgatgaaattatcctgctagatgcagga
ttggcttttcccacagacgggatgcatggagtcaatatagtactcccagacatgacttat
atacgggaaaatcgccacaaaattaaaggtatgattgttacccacggtcatgaagaccat
atcggtgggatagcctttcacctaaagcaatttgaaattcctgcgatttatggtccgaga
ctagcactggcaatgctggaggggaaattggaagaagcgggagtgcgcgatcgcactgag
ttaaaaactgtcctcccccgcgatgtggtgagaattggcaaacatttctttgtagaatat
attcgcaatacacactccatcgctgatagctttactgtagcgattcatacaccagttgga
atacttatccatacaggggattttaaaattgaccatacgcccgtagatggtgagcatttt
gacttgcaaagactagccgaacacggggagaaaggcgtactgtgcttgatgagtgattca
acaaactcagaagtaccgggatttacgccttcagaacgttctgtgtatccaaatctggac
agagtcttcagtcaagccactgggcgattatttgtgacaacctttgcctccagcgtgcat
cggattaacatggttttgcaactggcgcaaaagtataagcgtgtcgtgggcgtggtaggt
cgttccatgctgaatttgattgcccatgcccgtaatctaggatacatcaagtgtgatgag
aatctccttcagccgttgcaagcagtccgtaatatacctgaggaaaaggtcttaattttg
acgactggttctcaaggtgaaccgatgtcagcaatgactcggattgccaatcaagaacat
ccccatattagaattcgccaaggagatacggtcgtcttctcagccaaccccattcctgga
aatacaattgctgtagtcaccgtcatcgataaattgatgatgcagggagcaaatgtcatc
tatggtcgggataaaggaattcacgtctctggtcatggatgtcaggaagaccaaaagctg
atgattgctctgactaaacccaagttcttcctaccagttcacggagaacatcggatgctc
gtcaagcattcccaaacagctcagagtatgggcattcctgctgaaaacatggtgattatt
cagaatggaaatatcgtcgaactcacagaggaatcaatgcgtgttgctggtaaagtagca
tctggtctggaactggtagatacttccggtagtggcatggttagtgccaaagtgctccaa
gaacggcaacgtatggcagaagaaggtattgtcacaattgcgatggcgctagattggaat
ggcaagttgatggcaaagccagaaattcatctgcgaggtgttgtcacgagcatcgagcgc
cccttgctgcaaaagtgggtacaacagcggattgaagaaatcctcagcgttcgctggtca
gaatttgccccctcttttgatggtgaaaatcaacaggtggattggggtggattgcaaggg
cttttggagagggaactcgcacgctctttgcgcaaggaactacattgtcaaccgtccgta
actttattgatgcaaattcctgacgaaccaccagtaaaagtttctgatggaagaagacgt
cgtactcgtactgcagctcaggtagcatcgtag

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