Brasilonema sennae: DP114_32495
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Entry
DP114_32495 CDS
T10102
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bsen Brasilonema sennae
Pathway
bsen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DP114_32495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsen03019
]
DP114_32495
Messenger RNA biogenesis [BR:
bsen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DP114_32495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QDL11996
UniProt:
A0A856MS33
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All DBs
Position
complement(7722169..7723941)
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AA seq
590 aa
AA seq
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MAKNETLAALKIIPLGGLHEIGKNTCVFEYDDEIILLDAGLAFPTDGMHGVNIVLPDMTY
IRENRHKIKGMIVTHGHEDHIGGIAFHLKQFEIPAIYGPRLALAMLEGKLEEAGVRDRTE
LKTVLPRDVVRIGKHFFVEYIRNTHSIADSFTVAIHTPVGILIHTGDFKIDHTPVDGEHF
DLQRLAEHGEKGVLCLMSDSTNSEVPGFTPSERSVYPNLDRVFSQATGRLFVTTFASSVH
RINMVLQLAQKYKRVVGVVGRSMLNLIAHARNLGYIKCDENLLQPLQAVRNIPEEKVLIL
TTGSQGEPMSAMTRIANQEHPHIRIRQGDTVVFSANPIPGNTIAVVTVIDKLMMQGANVI
YGRDKGIHVSGHGCQEDQKLMIALTKPKFFLPVHGEHRMLVKHSQTAQSMGIPAENMVII
QNGNIVELTEESMRVAGKVASGLELVDTSGSGMVSAKVLQERQRMAEEGIVTIAMALDWN
GKLMAKPEIHLRGVVTSIERPLLQKWVQQRIEEILSVRWSEFAPSFDGENQQVDWGGLQG
LLERELARSLRKELHCQPSVTLLMQIPDEPPVKVSDGRRRRTRTAAQVAS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaacgaaactttagccgccctaaaaatcattccgttgggcggtttgcatgaa
attggtaaaaatacctgtgtttttgagtatgacgatgaaattatcctgctagatgcagga
ttggcttttcccacagacgggatgcatggagtcaatatagtactcccagacatgacttat
atacgggaaaatcgccacaaaattaaaggtatgattgttacccacggtcatgaagaccat
atcggtgggatagcctttcacctaaagcaatttgaaattcctgcgatttatggtccgaga
ctagcactggcaatgctggaggggaaattggaagaagcgggagtgcgcgatcgcactgag
ttaaaaactgtcctcccccgcgatgtggtgagaattggcaaacatttctttgtagaatat
attcgcaatacacactccatcgctgatagctttactgtagcgattcatacaccagttgga
atacttatccatacaggggattttaaaattgaccatacgcccgtagatggtgagcatttt
gacttgcaaagactagccgaacacggggagaaaggcgtactgtgcttgatgagtgattca
acaaactcagaagtaccgggatttacgccttcagaacgttctgtgtatccaaatctggac
agagtcttcagtcaagccactgggcgattatttgtgacaacctttgcctccagcgtgcat
cggattaacatggttttgcaactggcgcaaaagtataagcgtgtcgtgggcgtggtaggt
cgttccatgctgaatttgattgcccatgcccgtaatctaggatacatcaagtgtgatgag
aatctccttcagccgttgcaagcagtccgtaatatacctgaggaaaaggtcttaattttg
acgactggttctcaaggtgaaccgatgtcagcaatgactcggattgccaatcaagaacat
ccccatattagaattcgccaaggagatacggtcgtcttctcagccaaccccattcctgga
aatacaattgctgtagtcaccgtcatcgataaattgatgatgcagggagcaaatgtcatc
tatggtcgggataaaggaattcacgtctctggtcatggatgtcaggaagaccaaaagctg
atgattgctctgactaaacccaagttcttcctaccagttcacggagaacatcggatgctc
gtcaagcattcccaaacagctcagagtatgggcattcctgctgaaaacatggtgattatt
cagaatggaaatatcgtcgaactcacagaggaatcaatgcgtgttgctggtaaagtagca
tctggtctggaactggtagatacttccggtagtggcatggttagtgccaaagtgctccaa
gaacggcaacgtatggcagaagaaggtattgtcacaattgcgatggcgctagattggaat
ggcaagttgatggcaaagccagaaattcatctgcgaggtgttgtcacgagcatcgagcgc
cccttgctgcaaaagtgggtacaacagcggattgaagaaatcctcagcgttcgctggtca
gaatttgccccctcttttgatggtgaaaatcaacaggtggattggggtggattgcaaggg
cttttggagagggaactcgcacgctctttgcgcaaggaactacattgtcaaccgtccgta
actttattgatgcaaattcctgacgaaccaccagtaaaagtttctgatggaagaagacgt
cgtactcgtactgcagctcaggtagcatcgtag
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