KEGG   Bradyrhizobium septentrionale: HAP48_0000975
Entry
HAP48_0000975     CDS       T07866                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
bsep  Bradyrhizobium septentrionale
Brite
KEGG Orthology (KO) [BR:bsep00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bsep02044]
    HAP48_0000975 (tssC)
Secretion system [BR:bsep02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HAP48_0000975 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: UGY11734
LinkDB
Position
pBs1S1a:complement(247705..249189)
AA seq 494 aa
MTDTSVEQSTEVATMATDLSLLDQVLVETKITPRDEGYDLARRGVAAFLAELLKPSRADE
QVNNALVDRMIAEIDSKISAQLDHVLHTVEFQGLESVWRGLKFMVDRTDFRQNIKIELLS
VSKDELLTDFEDSPEIVKSGLYKHVYTAEYGQFGGEPVAAMISAYEFGSGSQDAKLMRYM
SAVAAMSHAPVIAAAAPDMFGVERHEEIAGLKDLQSVFEGPKYAKWTSFRESEDARYFGL
TLPRFLLRLPYGPETVPVKAFNYQEGSGGETDNYLWGNAAFAFATRLTESFAKYRWCPNI
IGPRSGGAVEDLNLHTYEAMGQLQTKVPTEVLISDRREFELAEQGFIALTMRKGSDNAAF
FSANSVQKPKYFGNTQEGKAAELNYKLGSQLPYMFIINRFAHYIKVLQRENIGSWKSKEE
LQDELNNWIRQYVADQENPSAEVRSRRPLRKAEIIVEDVDGEPGWYRVGIAVVPHLKYMG
ADFALTLKGKLDKQ
NT seq 1485 nt   +upstreamnt  +downstreamnt
atgaccgatacaagcgtggagcagtcgaccgaagtcgccaccatggccaccgatttgtcg
ctgctggatcaagtcctcgtcgaaaccaagatcaccccgcgcgacgaggggtacgatctc
gcccgccggggcgtcgcagccttcctcgccgagctcctcaaaccgagccgggccgacgag
caggtcaacaacgcgctcgtcgatcggatgatcgccgagatcgacagcaagatctcggct
cagctcgaccacgtgctgcatacggtcgagttccaagggctcgagtcggtctggcgcggt
ctaaagttcatggtcgaccgcaccgatttccgtcagaacatcaagatagaactcctcagc
gtcagcaaggatgaactgctcaccgacttcgaggacagcccggagatcgtcaagtccggc
ctgtacaagcacgtctacaccgcagagtacggtcagttcggcggcgagcctgtcgcagcc
atgatatcagcctacgagtttggcagtggcagtcaggacgctaagctgatgcggtacatg
agcgcggtggccgccatgtcgcatgcgcctgtcattgctgccgctgcgccggacatgttc
ggcgtcgaacgtcatgaggagatcgcgggtctaaaggacctgcaatcggtcttcgaggga
ccaaaatacgccaagtggacatcgttccgcgaaagcgaggacgctcgctatttcggcctg
acgctgccgcgcttcctgctgcgcttgccctatggtcccgagacggtcccggtgaaggca
ttcaattaccaagagggctccggcggcgaaactgacaactacctctgggggaatgctgct
tttgccttcgcgacgcgcttaaccgaaagcttcgccaaatatcgctggtgcccgaacatc
atcggcccccgatcgggcggcgcagttgaggacctcaatctgcatacctatgaggcgatg
gggcaattgcagaccaaggtaccgacggaggttctcatctcggaccggcgcgagttcgaa
cttgccgagcagggcttcatcgcgctgaccatgcgcaagggctctgacaatgccgctttc
ttctcggcaaattctgtgcagaagccgaaatatttcggtaacacccaggaaggcaaggcg
gccgagctcaactacaagcttggcagccagctgccctatatgtttatcatcaatcgtttc
gcacactacatcaaagtgctacagcgcgagaacatcggctcgtggaagagcaaggaagag
ttgcaagacgagctgaataactggatccgacagtatgtcgccgatcaggagaatccgtcg
gcagaggtgcgttcgcggcgacctttgcgaaaggcggagatcatagtcgaggacgtcgac
ggtgaaccgggctggtatcgcgtcggcatcgccgtcgttccacacttgaagtacatgggc
gcggattttgctttgacgctcaagggtaagctcgacaagcaatag

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