Bradyrhizobium septentrionale: HAP48_0011395
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Entry
HAP48_0011395 CDS
T07866
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
bsep
Bradyrhizobium septentrionale
Pathway
bsep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bsep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HAP48_0011395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsep03400
]
HAP48_0011395
Enzymes [BR:
bsep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
HAP48_0011395
DNA repair and recombination proteins [BR:
bsep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HAP48_0011395
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HAP48_0011395
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HAP48_0011395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
DACNK
Motif
Other DBs
NCBI-ProteinID:
UGY17976
LinkDB
All DBs
Position
complement(2005645..2007009)
Genome browser
AA seq
454 aa
AA seq
DB search
MAFVLYDLETSGLNKRFDQILQFAAVRTDADLNETHRFETRSRLLPHVVPSPQALLVTGH
TLAEANSPFRQSHYSMVCEIVNVLASWCPATFLGYNSIRFDEEFLRQAFYQCLHPIFLTN
RNGNARADVLNLMRAATTLHPSVMHAGLERDGRPTHRLGAMAAANGVPSRALHDAAADVD
AMLGLCRLVRAGAPDLWSTFLRFSAKPAVVDFVRDEDAFAYFDYFGRPQVMHFLTRVGVN
PNDGNSHYCLDLASDIDALRKLDDGELSQRLTQEPRPIRRLKVNASPLLYPLWDIEPDRF
VDLTEDELTRRASSVRGDPEFMAALTRAAASIEPIYPPSEHVEQQIYGGSFISDADSALS
RQFHSLPWQDRLDFAQRFQDDRLRRLARRLIFFESPHVLEEPERRLIVNDIAARRRGEGR
YTAPPWTTVPQALSELDAMIGEQSEALKIEFRSL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtggcattcgtcctgtacgatctcgaaacgtcagggttgaacaagcgcttcgaccagata
cttcagttcgccgccgtcaggaccgatgcagacctcaacgagacgcaccggttcgagacg
agatcgcgcctcttgcctcacgttgttccgtcaccgcaggcgttgctggtcaccgggcat
acgctggccgaagccaacagccctttcagacagtcgcactattcgatggtgtgcgagatc
gtgaacgtgctggcttcttggtgccctgcgacttttctcggttacaattcgatccgcttc
gacgaggagtttctgcggcaggcgttctatcaatgcctgcatccgatctttctgaccaac
aggaacggtaacgctcgcgccgacgtactcaacctgatgcgcgccgcgacgaccctgcat
ccatcggtcatgcacgcgggactggagcgggacggtcgtcccacgcaccgactcggtgcc
atggccgcggcgaacggcgtcccgtcacgcgcgctccacgacgccgcggccgacgtcgac
gccatgcttggtctatgccggctggtgcgcgccggcgcgcccgacctctggtcgactttt
ctccgcttctcggccaagccggcggtcgtcgatttcgtccgggacgaggacgctttcgcc
tacttcgactatttcgggcgtccgcaggtcatgcatttcctgacgagggtcggagtcaac
ccgaacgacggaaattctcactattgcctcgacctcgcgtccgacatcgacgccttgcgg
aagctcgatgacggcgaactatctcagcgcctgacgcaggagccgcgtcccattcgcaga
ctgaaggtcaacgcatcgcccctgctctatcctttgtgggacatcgaacccgatcggttc
gtggatctcaccgaagacgaactgacgcggcgagcgtcttcggttcgcggcgaccctgaa
tttatggcggctttgacccgcgcggcagcatcgatcgagccgatctatccgccctccgag
catgtcgagcaacagatctatggcggaagtttcatctcggatgccgattctgcgttgtct
cggcagtttcatagcttgccatggcaggacagattggactttgcgcagcgtttccaggac
gatcgactgagacgacttgcacgccgtctcatcttcttcgagagccctcacgtcttggag
gagcctgagcgccgcctgatagtcaatgatatcgcggcgcgccgtcgtggcgagggacga
tacacagcgccgccttggacgactgttcctcaagctctgtccgagctcgacgccatgatc
ggagaacaatcggaagctctcaaaatcgaattccgttcgctctga
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