KEGG   Bradyrhizobium septentrionale: HAP48_0012160
Entry
HAP48_0012160     CDS       T07866                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bsep  Bradyrhizobium septentrionale
Pathway
bsep03030  DNA replication
bsep03410  Base excision repair
bsep03420  Nucleotide excision repair
bsep03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bsep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HAP48_0012160 (polA)
   03410 Base excision repair
    HAP48_0012160 (polA)
   03420 Nucleotide excision repair
    HAP48_0012160 (polA)
   03440 Homologous recombination
    HAP48_0012160 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bsep03032]
    HAP48_0012160 (polA)
   03400 DNA repair and recombination proteins [BR:bsep03400]
    HAP48_0012160 (polA)
Enzymes [BR:bsep01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HAP48_0012160 (polA)
DNA replication proteins [BR:bsep03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     HAP48_0012160 (polA)
DNA repair and recombination proteins [BR:bsep03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     HAP48_0012160 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HAP48_0012160 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_5
Other DBs
NCBI-ProteinID: UGY18111
LinkDB
Position
2162502..2165567
AA seq 1021 aa
MPKTASTDPAKSAPKTAPKPVAAEPVATKAAAKGDHVFLVDGSGYIFRAYHALPPLNRKS
DGLQVNAVLGFCNMLWKLLRDMPEDNRPTHLAIVFDKSEVTFRNKLYPDYKAHRPPAPDD
LIPQFALIREAVRAFDLPCLEQSGFEADDLIATYARLATERGATTTIVSSDKDLMQLVND
KVVMYDTMKDRRIGRDEVIEKFGVPPEKVVEVQALAGDSTDNVPGVPGIGIKTAAQLIIE
YGDLDQLLFRAGEIKQPKRREALLENAEKARISRQLVLLDDKVALDVPLDDLAVHEPDSR
RLVAFLKAMEFSTLTRRVAEYAQIDPANVDADPGNKSGASVFSPLPPSDVTPAPGNGSTA
SAPATPASRERGKPSGARDDKNSSLKGTPGALAGTRGEAIRNTGFDRKAYQAIGSLDQLK
AFVARVPDTGYLAIEAMSESIDPMQGELSGLALALAPNDACYVPLSHRQPGGGAGLFDAG
LAPGQIKAADALAALKPLLESVGIQKVGFNVKFTSVMLAQHGITLRNIDDAQLMSYALDA
GRGSHALESLAERWFEHAVVSYGGLVGSGKGKLTFDQVTIDKATEYAAESADLILRLWRV
LKPRLVAERMTTVYETLERPLVSVLARMERRGISIDRQVLSRLSGDFAQTAARVEAEIQQ
IAGEPVNVGSPKQIGDIIFGKMGLPGGTKTKTGAWSTTAQVLDDLAEQGLEFPKKILEWR
QVSKLKSTYTDALPTYVNPQTHRVHTTYALAATTTGRLSSNEPNLQNIPVRTEDGRKIRR
AFIATPGHKLVSADYSQIELRLLAEIADVPVLRQAFRDGLDIHAMTASEMFGVPIKDMPS
EVRRRAKAINFGIIYGISAFGLANQLGIAREEASAYIKKYFERFPGIRAYMDETKDFCRR
NGYVTTLFGRKCYYPDIKASNASVRAFNERAAINARLQGTAADIIRRAMIRVEDALAEKK
LSAQMLLQVHDELIFEVPDDEVAATLPVVQKVMQDAPFPAVILSLPLQVDARAANNWDEA
H
NT seq 3066 nt   +upstreamnt  +downstreamnt
atgccgaaaacagcctccacagaccccgccaaatcagccccgaagaccgcccccaagccc
gttgccgccgagcccgttgctaccaaggccgcggcgaagggcgaccatgtcttcctggtc
gacggttcgggctacatcttccgcgcctatcacgcgctgccgccgctgaaccgcaagtcc
gacgggctgcaggtcaatgccgtgctcggcttctgcaacatgctgtggaagctgctgcgc
gacatgccggaggacaaccggccgacccatctggcgatcgtgttcgacaagtcagaggtc
accttccgcaacaagctctatcccgactacaaggcgcaccggccgccggcgccggacgat
ttgatcccgcaattcgcgctgatccgcgaggcggtgcgcgctttcgacctgccctgcctc
gagcagtcaggctttgaggccgatgatctgatcgcgacctatgcgcggctggcgaccgag
cgcggcgccaccacgacgatcgtgtcttccgacaaggacttgatgcagctcgtcaacgac
aaggtcgtgatgtacgacaccatgaaggatcgccgcatcggccgcgacgaggtgatcgag
aaattcggcgtgccgccggagaaggtggtcgaggtgcaggcgctggccggcgattccacc
gataacgttcccggtgtgccaggcatcggcatcaagaccgcggcacaattgatcatcgag
tatggcgatctcgatcagctgctgttccgcgccggcgagatcaagcagccgaagcggcgc
gaggcgctgctcgagaacgccgagaaagcccgcatctcgcgccagctcgtgctgctcgac
gacaaggtcgcgctcgacgtgccgctcgacgaccttgccgtgcatgagcccgactcgcgc
cggctggtcgccttcctcaaggcgatggagttctccaccctcacccgccgcgtcgccgaa
tacgcgcagatcgatcccgccaatgtcgacgccgatcccggcaacaagagcggcgccagc
gtgttctcgccactgccgccgtcggatgtcacgcccgcgcccggaaacggatcgaccgct
tctgcacccgcaacgccggcttcgagagagcgcggcaagccgagcggcgcgcgcgatgac
aagaactccagcctgaagggtacgccgggagcgctggctgggacccgcggcgaagcgatc
cgcaacaccggcttcgaccgcaaggcgtatcaggcgatcggcagcctcgaccagctcaag
gccttcgtcgcccgcgtgcccgacaccggctatctcgcgatcgaggcgatgtccgaatcg
atcgacccgatgcaaggcgagctctcgggacttgcactggcactggcgccgaacgacgcc
tgctacgtgccgctcagccaccggcagcccggcggcggcgcaggcctgttcgatgcaggt
ctcgcacccggccagatcaaggctgccgacgcgcttgcggcgctgaagccgctgctggag
tccgttggaattcagaaggtcggcttcaacgtcaagttcacctcggtgatgctggcgcag
cacggcatcacgctgcgcaacatcgatgatgcgcagctgatgtcttacgcactcgatgcc
ggccgtggctcgcatgcgctggagtcgctcgccgaacgctggttcgagcatgccgtcgtc
agctatggcggcctcgtcggcagcggcaagggcaagctgaccttcgatcaggtcacgatc
gacaaggcgaccgaatacgccgccgaaagcgccgatttgatcctgcggctgtggcgcgtg
ctgaagccgcgcctcgtcgccgagcggatgaccacggtctacgagacgctggagcggccg
ctggtgtcggtgctggcgcggatggagcggcgcggcatctcgatcgaccgccaggtgctg
tcgcgcctgtcgggtgatttcgcccagaccgcggcgcgcgtcgaggccgagatccagcag
atcgccggcgagccggtcaatgtcggcagcccgaagcaaatcggcgacatcattttcggc
aagatgggattgccaggcggcaccaagaccaagaccggcgcctggtcgaccaccgcgcag
gtgctggacgatctcgctgaacaaggcctcgaattccccaagaagatcctggagtggcgc
caggtctcgaagctgaaatcgacctacaccgacgcgctgccgacctacgtcaatccgcag
acccatcgtgtgcacaccacctacgcgctggctgcgaccacgacggggcggctgtcgtcg
aacgagccgaatttgcagaacatccctgtcagaaccgaggacggccgcaagatccgccgc
gccttcatcgcgacgccgggtcacaagctggtgtcggccgactactcccagattgagctg
cggctgcttgccgagatcgccgacgtgccggtgctgcgtcaggcattccgcgacgggctc
gacattcacgccatgaccgcctccgaaatgttcggcgtgccgatcaaggatatgccgagc
gaggtgcgccgccgcgccaaggcgatcaacttcggcatcatctacggcatctcggcgttc
ggcctcgccaaccagctcggcatcgcccgcgaggaagcttccgcctacatcaagaaatat
ttcgagcgcttcccgggcatccgcgcctatatggacgagaccaaggacttctgccgccgc
aacggctatgtgacgacgctgttcggccgcaagtgctattaccccgatatcaaggcctcc
aacgcctcggtgcgcgccttcaacgaacgcgccgcgatcaacgcccgcctgcagggcacc
gccgccgacatcatccgccgcgccatgatccgggtcgaggacgcactcgccgagaagaag
ctctcggcgcagatgctgctgcaggtgcacgacgaactgatcttcgaggtgcccgacgac
gaagtcgcggcgacgctgcccgtcgtgcaaaaggtgatgcaggatgcgccgttccccgcg
gtgatcctgtcgctgccgctgcaggtcgacgcccgcgccgccaacaattgggacgaggcg
cactag

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