Bradyrhizobium septentrionale: HAP48_0012435
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Entry
HAP48_0012435 CDS
T07866
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
bsep
Bradyrhizobium septentrionale
Brite
KEGG Orthology (KO) [BR:
bsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bsep03000
]
HAP48_0012435
Transcription factors [BR:
bsep03000
]
Prokaryotic type
Helix-turn-helix
Other families
HAP48_0012435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
AAA_lid_14
AAA_5
HTH_23
HTH_28
HTH_29
HTH_20
HTH_1
Mg_chelatase
HTH_30
HTH_17
HTH_7
IclR_C
Xre-like-HTH
HTH_11
AAA_2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
UGY18163
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All DBs
Position
2228782..2230647
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AA seq
621 aa
AA seq
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MANLSASNHVARVLSAANQVAGVDTETRIAASWRRCLVNHNLDPARRGPPQTLTEAEVRH
IAEPMEDLIQVAIPEIEDLARVLNDSGYCVNLADPNATMLVSRLPEGDYARMFLEWKIYT
GSNFAETFEGTNGLGTALAEQRPILVHGDEHFREQWHMFTCAVSPLFDHAGRLAGAVNIS
SCRSDLGRSAHELALAVTTEATRRIEQSFFRRRYRASWIATLPGDGHGMLAYDDDRRVVG
ACRTARGVFGLTDAMIDDGIELSRLIQLDDRATRTPDELVALRRADGTPWGRGHLAPPVR
ARSLRPLPTQPREKPAGQFGGLHRLAGRDPVLIKGVKRLMTVGNLDLPILLRGETGAGKD
VFARAIHAASSRAGRNYVALNCAAMPESLIDAELFGYEAGAFTGARREGSKGLIVQASGG
TLFLDEIGDMPLALQTRLLRVLENREVWPLGALKPVAVDIRLISATHRDLAQMAEDGSFR
SDLYYRLRGMEVRLPALRERADRKDVIAQIADEEAPHCRISADAWAQLMAYPFPGNMRQL
RHVLRLAGATAESGVITEADLDLPPFGARSAEADHAGGERAMIVEALRASGGRVTEAAKA
LRLSRATLYRKIKTLEIELEG
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggccaatctttcggcctcaaatcacgtcgcccgtgttttatcggcggccaatcaggtg
gccggcgtcgacaccgagacgcggattgccgcgtcctggcggcgctgcctggtcaatcac
aaccttgatccggcccggcgcgggccgccgcagacgctcaccgaagccgaggtccggcac
atcgccgaaccgatggaggacctgatccaggtcgcgatcccagagatcgaggacctcgcc
cgcgtactcaacgactccggctactgcgtcaacctcgccgaccccaacgccaccatgctc
gtgagccggctgcccgagggcgattacgcgcggatgttcctggaatggaagatctacacc
ggctcgaacttcgccgagacgttcgaaggcaccaacgggctcggcaccgcgctcgccgag
cagcggccgattctggtgcatggcgacgagcatttccgcgagcagtggcacatgttcacc
tgcgcggtgtcgccgctgttcgatcatgccgggcggctcgccggcgccgtcaacatctcg
tcgtgccgcagcgatctcggccgcagcgcgcatgagctggcgctggccgtgaccacggag
gcgacgcggcggatcgagcagtcgttcttccgccggcgctaccgcgcctcctggatcgcg
accctgcccggcgacgggcatggcatgctcgcctatgacgacgaccgccgcgtggtcggc
gcctgccgcaccgcgcgcggcgtgtttggactgaccgatgccatgatcgacgacggcatc
gagctgtcgcgtctgatccagctcgacgatcgcgcgacgcgcaccccggacgagctcgtt
gcgttgcgccgggccgacggcacgccgtggggacgcggccatctggcgccgccggtgcgg
gcgcgttcgctgcggcctctgccgacacagccgcgtgaaaaaccagccgggcagttcggc
gggctgcacaggctcgccggccgcgatcccgtgctgatcaagggcgtgaagcggctgatg
acggtcggcaatctcgatctgccgatcctgctgcgtggcgagaccggcgccggcaaggac
gtgttcgcgcgcgccatccacgccgccagcagtcgcgccggccgcaactatgtcgcgctg
aactgcgcggcgatgccggagagcctgatcgacgccgagctgttcggctacgaggccggc
gccttcaccggcgcgcggcgcgagggatcgaaggggctgatcgtgcaggcgagcggcggc
acgctgttcctcgacgagatcggcgacatgccgctggcgttgcagacgcggctgctgcgc
gtgctggaaaatcgcgaggtctggccgctcggcgcgttgaagccggttgcggtcgacatc
cgcctgatcagcgccacccatcgcgatctggcgcagatggccgaagacggcagcttccgc
tccgacctgtattaccggctgcgcggcatggaggtccggctgccggcgttgcgcgagcgt
gctgatcggaaagacgtcatcgcgcagatcgccgacgaggaggcgccgcattgtcgtatc
tcagctgacgcctgggcgcagctgatggcctatccgttccccggcaacatgcgccagctc
cgccatgtgctgcggctcgccggcgccaccgccgaaagcggcgtcatcaccgaggccgat
ctcgatttgccaccgttcggcgcacggagcgccgaggcggatcatgcgggaggcgagcgc
gcgatgatcgtggaggcgctgcgcgccagcggcggtcgcgtgaccgaggcggcgaaggcg
ctcaggctcagccgcgccacgttgtaccgaaagatcaagacgttagagatcgagctcgag
ggctag
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