Bradyrhizobium septentrionale: HAP48_0013315
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Entry
HAP48_0013315 CDS
T07866
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bsep
Bradyrhizobium septentrionale
Pathway
bsep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HAP48_0013315 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsep03019
]
HAP48_0013315 (recQ)
03400 DNA repair and recombination proteins [BR:
bsep03400
]
HAP48_0013315 (recQ)
Enzymes [BR:
bsep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HAP48_0013315 (recQ)
Messenger RNA biogenesis [BR:
bsep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HAP48_0013315 (recQ)
DNA repair and recombination proteins [BR:
bsep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HAP48_0013315 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
bDLD2
ResIII
Motif
Other DBs
NCBI-ProteinID:
UGY18326
LinkDB
All DBs
Position
2428264..2430132
Genome browser
AA seq
622 aa
AA seq
DB search
MTAQPALDHASTPPRDARAVLSSVFGLPGFRGAQERIIGHVTDGGNCLVLMPTGGGKSLC
YQLPSLLRDGCGIVVSPLIALMRDQVAGLSEAGVNAAVLNSTLSYQEASEVERRLLAGDL
DLLYVAPERLLTPRCLNLLGQAQIALFAIDEAHCVSQWGHDFRPEYIGLSALAERFPNVP
RIALTATADASTRKEIAERLQLTDAPQFVASFDRPNIRYEIVDKQNATTQLKNFIKERHA
GDAGVVYCLSRAKVEDVAASLSEAGIPALPYHAGLDASVRARHQDRFLNEDGIVIVATIA
FGMGIDKPDVRFVAHLDLPKSIEAYYQETGRAGRDGKPSAAWMAYGLSDIVQQRRMIDES
TGSDAFKRVSIGKLDALVALAETVHCRRQRLLGYFGEARAEESCGNCDNCLMPPRVRDGK
VLAQKLLSCAYRTGQRFGAMHLIDVLVGRLTERVKQFGHDQLSVFGIGRELNEKQWRAVL
RQLVAMGHLRADSDAFGALKLTDSARGVLKGETAVMLREQPEGARNRAIRGKSRRGELAP
AADGKGAAANPALHAALRAWRSEVARQRGVPAYVVLHDSTIDGIAAMRPDTLTELRGIAG
IGDKKLEHYGDELIRLVNRTEG
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgactgcccagcccgccctcgaccacgcatccacgccgcctcgcgacgcgcgcgccgtg
ctcagttccgtgttcggcctgccgggcttccgcggcgcgcaggaaaggatcatcggccac
gtcaccgatggcggcaattgcctggtgctgatgccgaccggcggcggcaagtcgctttgc
taccagctgccgtcgctgctgcgcgacggctgcggcatcgtggtgtcgcccctgatcgcg
ctgatgcgcgaccaggtcgccggcctctctgaggccggcgtcaacgcggcggtgctgaat
tcgacgctgtcctatcaggaggcctccgaggtcgagcggcggctgctcgccggcgatctc
gatttgctctatgtcgcgccggaacggctgctgacgccgcgctgcctcaatctgctcggc
caggcgcagatcgcgctgtttgcgatcgacgaggcgcattgcgtgtcgcaatggggccat
gacttccgcccggaatatatcggcctgtccgcgctcgccgagcgcttccccaatgtgccg
cgcatcgcactgaccgcgaccgcggatgcgtcaacgcggaaggagatcgccgagcggctg
cagctcaccgacgcgccgcaattcgtcgcgagcttcgaccggcccaacatccgctacgag
atcgtcgacaagcagaacgcgaccacgcagctgaagaacttcatcaaggagcggcatgcc
ggcgacgccggcgtggtctattgcctgtcccgcgccaaggtcgaggacgtcgcggcgtcg
ctcagcgaggccggcattccggcgctgccctatcatgccgggctcgatgcgtcggtacgc
gcccggcatcaggaccgcttcctcaacgaggacggcatcgtgatcgtcgcgaccatcgcc
ttcggcatgggcatcgacaagccggacgtgcgcttcgtcgcgcatctcgatctgcccaag
agcatcgaggcgtattaccaggagaccggccgcgccggccgtgacggcaagccctcggcc
gcgtggatggcctacggcctctccgacatcgtgcagcagcgccgcatgatcgacgaatcg
accggctccgacgccttcaagcgcgtctcgatcggcaagctcgatgcgttggtcgcgctg
gccgagaccgtgcattgccggcggcagcgcctgctcggctatttcggcgaggcgcgcgcg
gaggaaagctgcggcaattgcgacaactgcctgatgccgccgcgggtccgcgacggcaag
gtgctcgcgcagaagctgctctcctgcgcctatcgcaccgggcaacgttttggtgccatg
cacctgatcgacgtgctggtcgggcgactgaccgagcgcgtcaagcagttcggccacgac
caattgtcggtgttcggcatcggccgcgagctcaacgagaagcaatggcgtgcggtgctg
cgccagctggtggcgatggggcatctgcgcgccgacagcgacgcctttggcgcgctgaag
ctgaccgacagcgcgcgcggcgtgctgaagggcgagaccgcggtgatgctgcgcgagcag
ccggaaggcgcacgcaaccgcgcgatccgcggcaagtcgcgccgcggcgagctggcgccg
gcggccgacggcaagggcgcggcggccaaccccgcgctgcatgcagcgctgcgcgcctgg
cgctccgaggtggcgcggcagcgtggcgtgccggcctatgtcgtgctgcatgattccacc
atcgacggcatcgccgcgatgcggccggacacgctgaccgaactgcgcggcatcgccggg
attggcgacaagaagctcgagcattatggcgacgagctgatcaggctggtgaacaggacg
gaaggctga
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