Bradyrhizobium septentrionale: HAP48_0014295
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Entry
HAP48_0014295 CDS
T07866
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bsep
Bradyrhizobium septentrionale
Pathway
bsep00300
Lysine biosynthesis
bsep00470
D-Amino acid metabolism
bsep01100
Metabolic pathways
bsep01110
Biosynthesis of secondary metabolites
bsep01120
Microbial metabolism in diverse environments
bsep01230
Biosynthesis of amino acids
Module
bsep_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bsep00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HAP48_0014295 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HAP48_0014295 (dapF)
Enzymes [BR:
bsep01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HAP48_0014295 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
DUF2924
Motif
Other DBs
NCBI-ProteinID:
UGY18505
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All DBs
Position
complement(2646726..2647610)
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AA seq
294 aa
AA seq
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MSALANHAFAKMNGIGNEIVVVDLRDSEAQGRAQVSAAEARAVASPAGVPYDQLMVLQPP
RLDGTEAFISIYNNDGSEAGACGNGMRCVVRRIFEKTGQTAATFQTRAGLLNCWQGPAPD
LYTVDMGAPKFGWQDIPLAEEFRDTRYIELQVGPIDKPVLHSPSAVSMGNPHAIFWVDDV
NAYDLERFGPLLENHPIFPERANITLAHIVDRDHITIRTWERGAGLTRACGSAACATAVA
AARLKRANRIVEITLPGGKLGIEWRERDDHVLMTGTADFEYEGRFDPALFASVA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctcgccaatcacgcatttgccaagatgaacggcatcggcaacgagatcgtc
gtcgtcgacctgcgcgattcagaggcgcaaggtcgggcacaggtctcggcggcggaggcg
cgcgccgtggcctcgccggccggtgttccctatgaccagttgatggtgttgcagccgccg
cggctcgacggcaccgaagcgttcatctcgatctacaacaatgacggctcggaggccggc
gcctgcggcaacggcatgcgctgcgtggtgcgccggatcttcgagaagaccggccagacc
gcggcgacgttccagacccgcgccggcctgctcaattgctggcaggggccggcgcccgat
ctctacacggtcgacatgggcgcgccgaagttcggctggcaggacattccgctggcggag
gaattccgcgacacccgttacatcgagctgcaggtcgggccgatcgacaagccggtgctg
cattcgccctcggcggtctcgatgggcaatccgcatgcgatcttctgggtcgacgacgtc
aatgcctacgatctcgaacggttcgggccgctgctggaaaaccatccaatcttcccggag
cgtgccaacatcacgctcgcccatatcgtcgatcgcgaccacatcacgatccgcacctgg
gaacgcggcgccggcctgaccagggcctgcggctcggcggcctgcgcgaccgcggtggcg
gcggcacggctgaagcgcgccaaccgcatcgtcgagatcacgctgcccggcggcaagctc
ggcatcgagtggcgcgagcgcgacgaccacgtgctgatgaccggcaccgccgatttcgaa
tatgagggccgcttcgatccggcgctattcgccagcgtcgcttaa
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