Bradyrhizobium septentrionale: HAP48_0014930
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Entry
HAP48_0014930 CDS
T07866
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bsep
Bradyrhizobium septentrionale
Brite
KEGG Orthology (KO) [BR:
bsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsep03032
]
HAP48_0014930
03400 DNA repair and recombination proteins [BR:
bsep03400
]
HAP48_0014930
Enzymes [BR:
bsep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HAP48_0014930
DNA replication proteins [BR:
bsep03032
]
Prokaryotic type
DNA Topoisomerases
HAP48_0014930
DNA repair and recombination proteins [BR:
bsep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HAP48_0014930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF905
Motif
Other DBs
NCBI-ProteinID:
UGY18623
LinkDB
All DBs
Position
complement(2776931..2778103)
Genome browser
AA seq
390 aa
AA seq
DB search
MMDQQNIAAVRPMSADPAVALAKALGQWPKRPQAKLQPPRAKLNLDAPIKTSVEDLARDL
GLRLGDQNELTIRRIKRGKNYSFVRANGSRVRDARTIRRLHAMAVPPAYRQVRYSSDPSS
HLQAVGRDAAGRLQYRYHADWEKVREQRKAHRLAKLVAALPKIRRKVSAFLSGEEPTREF
ALSAVIELIARTAIRPGNESYARLNGTRGATTLLKSNVTLEDDSLVLTFKAKGGKAVRKE
CDAAKLVRAIGILRGVPGKRMFQYHDRSGVVRAASTTAVNAFLREIAGIKISLKDFRTLM
ASAVVVESLSRITPATSQRGRKRQVLDAIRAAADQLSNTPAICRKSYVHDTIVTAFEDGI
LERFAATMGGYRTQSKREQLLAQVVMAAGA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcagcagaacatcgcggctgtgcggcccatgtccgccgatcccgctgtcgcc
ctggcgaaggcgctaggccagtggcccaagcggccgcaggcaaagttgcagccgccgcgg
gccaagctcaacctcgacgcgcccatcaagacctcggtcgaggatctcgcgcgcgatctg
ggcctgcggctcggcgaccagaacgagctgaccatccgccgcatcaagcgcggcaagaac
tattcattcgttcgtgccaatggctcgcgggtccgcgatgcgcggacgatccgtcggctg
cacgccatggcggttccgccggcctatcgccaggtgcgctattccagcgatcctagctcg
catttgcaggcggtcggccgcgatgccgcaggtcgtttgcaataccgttatcacgccgat
tgggagaaggtccgcgagcagcgcaaggcgcatcgcctggccaagctcgtggcggcgctg
ccgaagatccggcgcaaggtctcggcgttcctgtccggcgaagagccgacgcgcgaattc
gcgctgtcggcggtgatcgagctgatcgcgcgcaccgcgatccggcccggcaacgaatcc
tatgcccgcctcaacggcacccgcggcgccaccacgcttttgaagtccaacgtcacgctg
gaagacgattctctggtgctgaccttcaaggccaagggcggcaaggccgtgcgcaaggaa
tgcgacgcggccaagctggtgcgggcgatcggcattctgcgcggtgtcccgggcaagcgc
atgttccagtatcacgaccgctccggcgtcgttcgcgccgcctcgaccacggcggtgaac
gcgttcctgcgcgagatcgccggcatcaagatctcgctgaaggatttccgcacgctgatg
gcgtcggccgtcgtcgtggagtcgctgtcgcggatcacgccggccaccagccagcgcggc
cgcaagcgccaggtgctggatgcgatccgcgccgccgccgaccagctctccaacacgccg
gcgatctgccgcaagagctacgtccacgacaccatcgtcactgccttcgaggacggcatc
ctcgaacgcttcgccgcgacgatgggaggctaccgcacccagtccaagcgcgagcagctg
ctggcgcaggtggtgatggcggccggggcgtaa
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