KEGG   Bradyrhizobium septentrionale: HAP48_0019395
Entry
HAP48_0019395     CDS       T07866                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
bsep  Bradyrhizobium septentrionale
Brite
KEGG Orthology (KO) [BR:bsep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bsep03400]
    HAP48_0019395
Enzymes [BR:bsep01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HAP48_0019395
    5.6.2.6  RNA 3'-5' helicase
     HAP48_0019395
DNA repair and recombination proteins [BR:bsep03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HAP48_0019395
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C Cas3-like_C_2 MksE
Other DBs
NCBI-ProteinID: UGY20579
LinkDB
Position
3731608..3734373
AA seq 921 aa
MSTLDLFSVTPSETADLLPRRFRDWFASRGWSPREHQLALLAKAREARSALLIAPTGAGK
TLAGFLPTLAELSGEGPVRDVASHLPLKGGGRLARARNGAPARDGWGSAAGAEQAAAPHP
SPPPFRGREPDDLASGEATASARSRPSLSSTGRGVRRSAGLHTLYISPLKALAVDIARNL
ETPVAEMGLPIRIETRTGDTPVSRRQRQRRYPPDILLTTPEQLALLLASDDAPFLFSSLK
RIVLDELHALVTSKRGDLLSLGLARLRTIAPQARAIGLSATVAEPEQLARFLVPQPDGES
VSADVVIAGGAAPPVVEMLDTRERLPWSGHSARHALPEVYELIKRNKTTLVFVNTRSQAE
MLFQDLWRMNDDGLAIALHHGSLDVAQRRKVEDAMAAGRLRGVVCTSSLDLGVDWGDVDL
VINIGAPKGSSRLMQRIGRANHRFDEASRAVLVPANRFEVLECRVAIDAIAENAQDTPPL
RSGALDVLAQHVLGCACGKPFLSDELYDEVRTAAPYASLARTDFDDVVAFVATGGYALKT
YERFARIKQDKQGRWRVTNPKVRQSYRLNVGTIVEETMLKVRLVRSRAGGTGSTGAIARG
GRMLGEIEEVFIEGLVSGDTFVFGGEVVRYEALVEDQVYVSRANDKDAKVPSYMGGKFPL
STYLAERVRKLLDNSRAWNALPDQVHDWLSLQRKFSRVPAVRELLVETFPRGGSHYLVCY
PFEGRLAHQTLGMLLTRRLERARARPLGFVANEYAVAVWGVGDLSFMIRQGKLDLNALFD
PDMLGDDLEAWLAESALMKRTFRNCAIISGLIARRFTDEEKSRRQVLFSTDLIYDVLRKH
QADHVLLRAARGDAATGLLDLRRLSDMLSRIHGRITHKALDRVSPLAVPALLEIGRESVY
GEASDELLAEAAEELVREATT
NT seq 2766 nt   +upstreamnt  +downstreamnt
gtgtcgacgctcgatctcttttccgtcacgccgtcggaaacggccgatctcttgccgcgc
cggtttcgcgactggttcgcctcacgcggctggtcgccgcgcgagcaccagctcgcgctg
ttggcgaaagcgcgcgaggcgcgttccgcgctgctgatcgcgcccacgggtgcaggcaag
acgctggcggggttcttgccgacgctggcggaactgagcggggagggaccagtccgtgat
gtcgcttctcacctccccctgaaagggggaggtcggctcgctcgggcacgcaatggcgca
cctgcgcgggacgggtgggggtcagccgcgggcgcggagcaagcggctgccccccacccc
agccctccccctttcagggggagggagcctgacgatctcgcaagcggagaggcaacggcg
tccgcgagatcgcgccccagcctcagctccactggccgcggcgttcgccgctccgccggc
ttgcacacgctttacatctcgccgctgaaagcgctcgcggtcgacatcgcgcgcaacctg
gagacgccggttgccgagatggggctcccgatcaggatcgagacccgcaccggcgacacg
ccggtgtcgcggcggcagcggcagcggcgctatccgccggacattctgctcaccacgccc
gagcaactcgcgctgctgctcgcctccgacgacgcgccgtttctgttctcctcgttgaag
cgcatcgtgctcgacgagctgcacgcactggtcacctccaagcgcggcgatctgctgtcg
ctcgggctggcgcggctccggaccatcgcgccgcaggcgcgcgccatcggcctttcggca
acggtggccgaacctgagcagctggcgcgcttcctggtgccgcagccggacggcgagagc
gtgtccgccgacgtcgtcatcgccggcggcgccgcgccgccggtggtcgagatgctcgac
acgcgggagcggctgccatggtccggccacagcgcgcgccatgcgctgcccgaggtctat
gagctgatcaagcgcaacaagaccacgctggtgttcgtcaacacccgcagccaggccgag
atgctgttccaggatctctggcgcatgaatgacgacgggcttgcgatcgcgctgcatcac
ggctcgctcgacgtcgcgcagcgccgcaaggtcgaggacgcgatggccgccggccgtctg
cgcggcgtggtctgcacctcatcgctcgacctcggcgtcgactggggcgatgtcgacctc
gtcatcaatatcggcgcgccaaagggctcgtcgcggttgatgcagcggatcggccgcgcc
aaccaccgcttcgacgaggcctcgcgcgccgtgctggtgccggccaaccggttcgaggtg
ctggaatgccgtgtcgcgatcgatgccatcgccgagaatgcgcaggacacgccgcccttg
cgctcgggcgcgctcgacgtgctggcccagcatgtgctcggctgcgcctgcggcaagccg
ttcctgtccgacgaactctatgatgaggtcaggaccgcggcgccctatgcgtcgctggcg
cggacggatttcgacgacgtcgtcgccttcgtcgcgaccggcggctacgcgctgaagacc
tatgagcgtttcgcgcggatcaagcaggacaagcagggccgctggcgcgtcaccaatccc
aaggtgcggcagagctaccgcctcaacgtcggcaccatcgtcgaggagaccatgctgaag
gtgcggctggtgcggtcacgcgccggcggcaccggatcgaccggcgcgatcgcccgtggc
ggccgcatgctcggcgagatcgaggaagtgttcatcgaaggcctcgtgtccggcgacacg
ttcgtgttcggcggcgaggtggtgcgctacgaggcgctggtcgaggaccaggtctacgtc
tcccgcgccaatgataaagacgcaaaagtgccgtcctatatgggcggcaagttcccgctc
tccacctatctcgccgagcgcgtccgcaaattgctcgacaacagccgtgcctggaacgcg
ctgccggaccaagtgcacgactggctgtcgctgcagcgaaagttctcccgcgtccccgcg
gtgcgcgaactgctggtggaaacctttccgcgcggcggcagccattatctggtctgctat
cccttcgagggccggctcgcgcatcagacgctcggcatgctgctgacgcgccggctggag
cgcgcccgcgcccgtccgctgggtttcgtcgccaacgaatatgcggttgcggtctggggc
gtcggcgatctctccttcatgatccggcagggcaagctcgatctcaatgcgctgttcgat
cccgatatgctcggcgacgacctcgaggcgtggctcgcggaatccgcgctgatgaagcgg
accttccgcaattgcgccatcatttccggcctgatcgcgcgccgcttcaccgacgaggag
aagtcgcgccgccaggtgctgttctcgaccgatctgatctacgacgtgctgcgcaagcac
caagccgaccatgtgctgctgcgcgccgcgcgcggcgatgccgccacagggttgctcgat
ctccgccgcctcagcgacatgctttcgcgcatccatggccgaatcacccacaaggcgctc
gatcgcgtttctccgcttgccgtccccgcgctgctggaaatcggccgcgagtcagtttat
ggcgaagcatccgacgagctcctggccgaggcggccgaggaactcgtgcgggaggcgacg
acataa

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