Bradyrhizobium septentrionale: HAP48_0019825
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Entry
HAP48_0019825 CDS
T07866
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bsep
Bradyrhizobium septentrionale
Pathway
bsep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HAP48_0019825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsep03019
]
HAP48_0019825
Enzymes [BR:
bsep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HAP48_0019825
Messenger RNA biogenesis [BR:
bsep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HAP48_0019825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
HEM4
SUa-2TM
DUF8086
CMS1
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
UGY19501
LinkDB
All DBs
Position
complement(3827187..3828608)
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AA seq
473 aa
AA seq
DB search
MTSFQDFGLAEPIARALREENYLTPTPIQAQTIPLALAGRDVVGIAQTGTGKTASFALPI
LHRLLENRVRPQPKSCRVLVLSPTRELSGQILDSFNAYGRHLRLSSALAIGGVPMGRQVR
SVMQGVEVMVATPGRLLDLVQSNGLKLNQVEFLVLDEADRMLDMGFINDIRKIVAKLPIR
RQTLFFSATMPKDIAELAEAMLRDPARVAVTPVASTVDRIAQRVIQVDFAAKPAILAQLL
KQEPVNRALIFTRTKHGADKVVKGLERAGISANAIHGNKSQNHRERTLAAFRTGEIRTLV
ATDIAARGIDVDGISHVVNFDLPNIPETYVHRIGRTARAGADGVAISLIAGAEEMGYLRD
IERLIRVTLPREDRRTPGSNRETAPAQAPHPHRGGRSAPRAHNVRGKNEAAPSGKGPRRR
RRPGGNNGAPQTSRGESPRPSQAGNSEGIQGVAFLHRESRPNPQPNRNNRPKH
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
ttgacctcctttcaggatttcggcctcgccgaacccatcgcccgcgcgcttcgtgaagag
aactatctcacaccgacccccatccaggcccagaccatcccgctcgcacttgccggccgc
gacgtcgtcggcatcgcccagaccggaaccggcaagaccgcgtccttcgcgctgccgatc
ctgcaccggctgctggagaaccgtgtccgcccgcagcccaagagctgccgcgtgctggtg
ctctcgcccacccgcgaactgtccgggcagatcctcgacagcttcaatgcctatggccgc
cacctccggctgtcctcggcgctcgcaatcggcggcgtcccgatgggccgccaggtccgc
agcgtgatgcagggcgtcgaggtgatggtcgccacccccggccgcctgctcgatctcgtg
cagagcaacggactgaagctcaaccaggtcgagttcctggtgctcgacgaagccgaccgc
atgctcgacatgggcttcatcaacgacatccggaaaatcgtcgccaagctgccgatccgg
cgccagacgctgttcttctcggccaccatgcccaaggacattgccgaactcgccgaagcg
atgctgcgcgaccccgcccgcgtggcggtgacgccggtggcctcgacggtcgaccgcatc
gcccagcgcgtgatccaggtcgatttcgcggccaagccggcgattctcgcccagttgctg
aagcaggaaccggtcaatcgcgccctgatcttcacccgcaccaagcatggcgcggacaag
gtggtgaaaggcctcgagcgagccggcatcagcgccaatgccatccacggtaacaagtcg
cagaatcaccgcgagcgtacgctggcggcattccgcaccggcgaaatccgtacactggtg
gcgaccgatatcgccgcccgcggcatcgacgtcgacggcatcagccatgtcgtgaatttc
gacctgcccaacatcccggagacctacgtccaccgcatcggccgcaccgcgcgcgccggc
gccgacggggtcgcgatctcgctgatcgcgggtgccgaagagatgggctatttgcgtgac
atcgaacggctgatccgcgtcacgctgccgcgggaagaccgccgcacgccgggcagcaac
cgcgaaaccgcaccggctcaggcgccccacccgcaccggggtggccgttctgcgccgcgc
gcgcataatgttcgtgggaagaatgaggcggctccaagtggaaaagggcctcgccgccgc
cgccgtccaggtggtaataatggcgcgccgcagacgagccggggcgagtcgccgcgtccg
tcgcaggccggcaacagcgaaggcatccagggcgtcgccttcttgcatcgcgagagccgg
ccgaatccgcaacccaaccgcaacaaccgaccgaagcactag
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