Bradyrhizobium septentrionale: HAP48_0026940
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Entry
HAP48_0026940 CDS
T07866
Name
(GenBank) hypothetical protein
KO
K18879
type III effector protein XopD
Organism
bsep
Bradyrhizobium septentrionale
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C48
RickCE_cat
YdfZ
Motif
Other DBs
NCBI-ProteinID:
UGY12321
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All DBs
Position
5279525..5283586
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AA seq
1353 aa
AA seq
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MNFVSMNRVRQQTDSVDAQDASPANSSAEAAAFQRQLSEVAVPSSPVLMQARAHQADASR
SEARPIMRASGQPYTPAPHGECGGTMLNASALPLGHANLVFAGSSMDPVYSEDASLIERL
GPALFKAGASERTVRRNVRCLLGLGHWLVKNGKPGIDARLYEESLDKDAQEFGKQEGQAV
ATPLDHLRAAQSPGGIAPIASRVELNPYPQDADLINRYKEDAASGTANTVRTYATLLIDF
SDYLRENDKPGIAARLGDGSLDNDVSQYKEADPRGRRKAGAALAHLLRSPAGARAIDLRR
HIRSVPDLEEAVRAEPRRTRAATAQHSGSNGAISWPETLPANQQDLLLETMDGPSSSPPL
ETIAHHQQAADAGGSFRDLNLPRDDHGVPPPHGLALDPAESLNWRHHDDELTDKRHRNPL
GPGEQVLVNDEHDIGELRSAKRQKTLSNPQGVAVERQLMQMPSHQLAAAPSQMQALMPSP
DELIGEQLPGEDAELLARFRLDAERRKLTPGAIKNGVSGLGAFVRWVNASHGGSVASRLR
RGATLDEEIAAYRSLGRDPQRRITSALDVLRRLLRGGEEAEAPEPRVLGAPRRLVPHPED
APLIEGALSQALKNLKTAKEKGSAQKRATRLRALSAWLKGNRKGSIIGRLNGSSKEQLTL
DNDVLAFQRTGGRIYGPDLSHLRSYLKLIEANRELGLPGPEQPSSPAAQGDRHPGSAQDL
PSTLASPSAGAWVWLGEQLQEPASPSRPPSHAKGRLEPSVDLNAPTPSELRDDAHFAPAP
AARARSDTYGGLESFVDLDAPTPSELRDDAHFAPAPAARARSDTYGGLESFVDLDAPTPS
ELRDDAHFAPAHPARARSDTYAGLEPFVDLDAPTPSELRDDAHFAPAHPGRARSDTYAGL
EPFVDLNAPTPSELRDDAHFAPAHPARARSDTYAGLEPFVDLNAPTPSELRDDAHFAPAL
PAGARSGTYAGLEPFVDLNAPTPSELRDDAHFAPAHPARARSDTYAGLEPFVDLNPPTPS
ELRDDAHFAPAHPARARSDTYAGLEPFVDLNPPTPSELRDDGHFAPAPAARAHSDTYGGL
ESFVDLDAPTPSELRDDAHFAPAPAAGARSDTYRGFPLVDLTAATPSSESRDDANSVRPF
PSTSANAQIGALDPTASSHGHGLVLEDTEWLGDEHIDRDYRLQEQDLRRNHPDLAARTRF
VNPLIVLNYLRSNDDGFVRTEFQRIVDDDNGNDAADFLFLPVINADPEDPNSLGNHWSLL
FVDRSDRGRPVAYHYDSYGGLNNKDAEHLAGRLDLRLEPARMAQQRNGYDCGVFVVDGTR
ALVRQLEQGREPHLLNLSNVVANRQALQNRLRG
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgtctcaatgaatcgcgtgcgtcaacaaacggatagcgtggacgcgcaagat
gcctctccggccaactcgtcggcagaggcggcggcctttcagcggcagctgagcgaggtc
gctgtcccgtcctctcccgtgctcatgcaggcccgcgcccatcaagcggatgcatcgcga
tctgaggcgcggcccatcatgcgggcgagcgggcaaccatatacgccggctccgcacggt
gaatgcggtggaacgatgctgaatgcgtcggcgctgccgctcggccatgcaaatttggtt
ttcgcaggtagcagcatggatcctgtttattccgaagatgcgtctcttattgagcggctc
gggccggcactcttcaaggctggggcctccgagcgcaccgtcaggcgcaatgtacgttgt
cttctcggattggggcattggctcgtaaagaacggaaagccgggcattgatgcccggctt
tacgaagagtcgctggacaaggatgcccaggagtttggcaagcaggaggggcaggccgtc
gctacgccactggatcatcttcgagccgcccaatcgccgggcggcatcgcgccgattgca
agccgggttgagctgaatccctatccccaagatgcggatctcattaacaggtacaaggaa
gatgcagcgtcaggcaccgccaacaccgtcaggacctatgcaactcttcttatcgatttc
agtgattacctccgtgaaaacgataagcccggcattgctgctcgacttggcgacggctcg
ctggataatgatgtcagccagtataaggaggcggacccccgtggccgcagaaaagccggg
gccgcactggctcatctcctgaggtcgccggcgggtgctagagcgatcgacctccggcgt
catattcgctccgttcctgatctcgaagaggcggttcgcgccgagccgaggcggacccgg
gccgcgactgcgcagcacagcgggtcgaacggagctatcagctggccggagactctgcct
gcgaaccagcaggatctgcttttggagacgatggacggacccagctcctcgccgcctctc
gagacaatcgcgcaccatcaacaagcagcggatgccggagggtcttttcgtgacttgaac
ttgccccgcgacgaccatggggttccaccgccgcatggcctggcattggatcctgcagag
tccctgaactggcgccaccatgacgacgaactgacggataaacgtcacaggaacccgctc
gggccaggcgagcaggttctcgtcaacgatgagcatgatataggggagttgagatcagcg
aagaggcagaagacgctaagcaatccgcagggcgtcgccgttgagcggcagctgatgcag
atgccatcccatcaactggcggcggcaccttcgcagatgcaggctctgatgccgtcgccg
gacgagctgatcggcgagcagctcccgggcgaagacgcggagctcttggcgaggtttcgt
ttagacgccgagcggcgcaagctcaccccaggcgccatcaagaacggtgtttccggactt
ggggcatttgttcgctgggtcaacgcaagtcatggggggtccgtagcttctcggctgcga
agaggtgcaacgctggatgaggaaattgcggcgtaccggagcttgggccgtgacccccag
cgccgcattacatcggctctggatgttctccggcggctcttgcgtgggggtgaagaagcc
gaagctcccgaaccccgcgtcctcggtgccccacgtcgcctggttcctcatccagaagat
gcgcccctcatcgagggcgcgctgagccaagctctgaaaaatcttaaaactgcgaaggag
aaggggtctgcgcaaaagcgggcgacacgtcttcgtgcgctgagtgcgtggctcaaaggg
aatcgcaaagggagcatcatcgggcgacttaacggctctagcaaggagcagttaacgctg
gacaacgatgtgctcgcgttccaacggactggaggcagaatatacggtcccgatttgtcg
catcttcgcagctacttaaaactcatcgaggcgaaccgagagctggggctgccaggccct
gagcagccgagctcgccggccgcgcagggcgatcggcatcccggctcggcgcaggatctt
ccctcaacgctggcaagcccaagcgcgggagcttgggtttggttgggtgaacagctgcaa
gaaccagcatcaccatccaggcccccgtcacatgctaagggcaggcttgagccatctgtt
gatctgaatgcgccgacgccgtccgagctgcgcgacgatgctcactttgcgccggcgcct
gctgccagggctcgctcagacacctacggcggtcttgagtcttttgttgatctggatgcg
ccgacgccgtccgagctgcgcgacgatgctcactttgcgccggcgcccgctgccagggct
cgctcagacacctacggcggtcttgagtcttttgttgatctggatgcgcccacgccgtcc
gaattgcgcgacgatgctcactttgcgccggcgcatcctgcccgggctcgttcagacacc
tacgctggtcttgagccatttgttgatctggatgcgccgacgccgtccgagttgcgcgac
gatgctcactttgcgccggcgcatcctggcagggcccgctcagacacctacgctggtctt
gagccatttgttgatctgaatgcgccgacgccgtccgagttgcgcgacgatgctcatttt
gcgccagcgcatcctgcccgggctcgttcagacacctacgctggtcttgagccatttgtt
gatctgaatgcgccgacgccgtccgagttgcgcgacgatgctcattttgcgccagcgctc
cctgccggagctcgttcaggcacctacgctggtcttgagccatttgttgatctgaatgcg
ccgacgccgtccgaattgcgcgacgatgctcactttgcgccggcgcatcctgcccgggct
cgttcagacacctacgctggtcttgagccatttgttgatctgaatccgccgacgccgtcc
gagttgcgcgacgatgctcactttgcgccggcgcatcctgcccgggctcgttcagacacc
tacgctggtcttgagccatttgttgatctgaatccgccgacgccgtccgagttgcgcgac
gatggtcactttgcgccagcgcccgctgccagggctcactcagacacctacggcggtctt
gagtcttttgttgatctggatgcgcccacgccgtccgaattgcgcgacgatgctcacttt
gcgccggcgcccgctgccggggctcgctcagacacctaccgtggttttccattggttgat
ctgactgcggccacgccgtcctccgaatcacgcgacgatgctaattctgtacggccgttt
ccgagcacctccgctaatgctcagatcggggctttagatccgacagcctcgtcccacggc
cacgggctggtgctcgaggacacggaatggctgggcgacgagcatatcgacagggattac
cggctccaggagcaggatttgcggaggaaccatccggatctcgccgcccggacgcggttc
gtgaatcccctcatagtcctaaattatctgcgctctaacgacgatggcttcgtgcgaacc
gaattccagcgcatcgtcgatgatgataatggtaatgatgcagccgacttcctgttcctg
cccgtgattaatgccgatcctgaagatcctaatagcctcggcaaccattggtcgctgctg
ttcgttgatcgcagcgaccggggccggccggtcgcctatcactacgattcctacggcgga
ctcaacaacaaggatgcagaacatctcgcaggtaggctggacctccgcctggagccagcc
cgcatggcccagcagcggaacgggtatgattgcggtgtcttcgtggtggacgggacgcgg
gcgctggttaggcaattggagcaaggacgggaaccacacctgctgaacctcagcaacgta
gttgccaatcggcaggcactgcagaaccgactcaggggctga
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