Bradyrhizobium septentrionale: HAP48_0038040
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Entry
HAP48_0038040 CDS
T07866
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bsep
Bradyrhizobium septentrionale
Pathway
bsep03420
Nucleotide excision repair
bsep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bsep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HAP48_0038040
03430 Mismatch repair
HAP48_0038040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsep03400
]
HAP48_0038040
Enzymes [BR:
bsep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HAP48_0038040
DNA repair and recombination proteins [BR:
bsep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HAP48_0038040
MMR (mismatch excision repair)
Other MMR factors
HAP48_0038040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
RecR_HhH
AAA_12
HHH
DEAD
Motif
Other DBs
NCBI-ProteinID:
UGY14308
LinkDB
All DBs
Position
7611780..7613849
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AA seq
689 aa
AA seq
DB search
MPELANTAYLDALNSEQRRAVEHGIGKDCIVGAPLLVIAGAGSGKTNTLAHRVAHLIVAG
ADPCRILLMTFSRRAAAEMAGRVERIARRVLGDRASIMTDALSWAGTFHGIGARLLREFA
ERIALEPIFTIHDREDSADLMNLVRHDLGFSRTESRFPTKGTCLAIYSRCVNAEMPIEAV
LGQFFPWCAGWAGELKQLFAAYVEAKQRQNVLDYDDLLLYWAQMVTDTALAEEIGGRFDH
VMVDEYQDTNRLQSSILLALKPGGRGLTVVGDDAQSIYSFRAATVRNILDFPSQFSPAAE
IVTLDRNYRSTQPILSAANGVISLAKERFTKNLWTDRTSTRKPLLVTIRDEADQARYIVE
QVLANREEGALLKHQAVLFRTSSHSGPLEVELTRRNIPFVKFGGLKFLDAAHVKDMLALL
RFTANPRDRVAGFRILHLLPGVGPASAQRVLDCMAEAADPIAALAELPATPRAGADWRLF
VEAIENLRYSEWPVDIERARHWYEPHLDRIHEDSEVRRADLIQLEQIAAGYPSRERFLTE
LTLDPPDATSDQAGVPLLDEDYLILSTIHSAKGQEWKSVYLLNVVDGCMPSDLGAGTSAE
LEEERRLLYVAMTRAKDDLHLLVPQRFFVHGQAAKGDRHMYASRTRFIPERLLPMFERTT
WPRAAAAQAAAASRAPPIDIGARMRGMWR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaacttgccaacacagcctatctcgatgcgctcaattccgagcagcgccgtgcg
gtcgagcacgggatcggtaaggattgcatcgtcggcgccccgctgctggtgatcgcgggc
gcgggctccggcaagaccaacacgctcgcccatcgcgtcgcgcatctgatcgtcgcaggc
gccgatccctgtcgcatcctgctgatgaccttttcgcggcgagccgccgccgaaatggcc
ggccgcgtcgagcgcatcgcacggcgcgtgctcggcgatcgcgcctccatcatgaccgat
gcgctgagctgggccggcacgttccacggcatcggcgcgcggctgctgcgggaattcgcc
gaacgcatcgccctcgagccgatcttcacgatccatgatcgggaggactccgccgacctg
atgaacttggtccgccacgacctcggtttctcccgcaccgaaagccggtttcccaccaag
ggcacctgccttgcgatctattcgcgctgcgtgaacgccgagatgccgattgaagccgtg
ctcggtcagttcttcccctggtgcgccggctgggccggcgaattgaagcagttgttcgct
gcctatgtcgaagccaagcaacggcagaacgtgctcgattacgatgacctcctgctctat
tgggcgcagatggtgacggacacggcattggccgaggagatcggcggccgcttcgaccat
gtgatggtcgacgaatatcaggacaccaaccgcctgcagtcctccatcctgcttgcgctc
aagcccggggggcgcgggctcaccgtggtcggcgacgacgcgcagtcgatctattcgttc
cgtgccgccaccgtgcgcaacatcctcgacttcccgtcgcagttcagcccggcagccgag
atcgtcacgctcgaccgcaactatcgctcgacgcagccgatcctgtcggcagccaatggc
gtgatctcgctcgccaaggaacgcttcaccaagaacctgtggaccgaccgcacctcgacc
cgcaagccgctgctcgtcacgatccgcgacgaggccgatcaggcgcgctacatcgtcgag
caggtgctggccaaccgcgaagaaggcgcgctgctcaagcaccaggcggtgctgttccgc
acctcctcgcacagcggaccgctcgaggtcgagctgacccgccgcaatattccgttcgtg
aaattcggcgggctcaaattcctcgatgctgcacacgtcaaggacatgctggcgctgctg
cgcttcaccgccaatccgcgcgaccgggtcgcgggctttcggatcctgcatctgttgccc
ggcgtcgggccggcctcggcgcagcgcgtgctcgactgcatggccgaggccgccgatccg
atcgcagcgctcgcagaactgcccgccacgccccgcgccggtgccgactggcggctgttc
gtcgaggccatcgagaacctccgctattcggaatggcctgttgacatcgagcgcgcgcgc
cactggtacgagccgcatctcgaccgcatccacgaggatagcgaggtccgccgcgccgac
cttatccaacttgagcagattgccgccggctatccgtcacgcgaacgcttcctcaccgag
ctcacactcgatccgccggacgcgaccagcgaccaggccggcgtgccgctgctcgacgag
gattacctgatcctgtcgacgatccactccgccaaggggcaggaatggaagtccgtctac
ctgctcaatgtcgtcgatggctgcatgccctccgatctcggcgccggcacatcggcggaa
ctcgaggaggagcgccgcctgctctatgtcgccatgacccgcgccaaggacgatctgcat
ctgttggtgccgcagcgctttttcgtccacggccaggcggccaagggcgaccgccacatg
tacgcctcgcgcacccgtttcatcccggaacggctcctgccgatgttcgagcggaccacc
tggccgcgcgccgccgccgcgcaggccgcggccgccagccgcgcgccgccgatcgacatc
ggagcccggatgcgcggcatgtggcgctga
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