Bradyrhizobium septentrionale: HAP48_0038175
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Entry
HAP48_0038175 CDS
T07866
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bsep
Bradyrhizobium septentrionale
Brite
KEGG Orthology (KO) [BR:
bsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bsep03009
]
HAP48_0038175 (rimO)
Enzymes [BR:
bsep01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HAP48_0038175 (rimO)
Ribosome biogenesis [BR:
bsep03009
]
Prokaryotic type
ribosomal protein modification factors
HAP48_0038175 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
NTPase_1
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UGY14334
LinkDB
All DBs
Position
7638090..7639409
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AA seq
439 aa
AA seq
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MERAPHISFVSLGCPKALVDSERIITRLRAEGYELARKHDGADIVIVNTCGFLDSAKQES
LAAIGEAMAENGKVIVTGCMGAEPEQIESAYPGVLSITGPQQYESVLDAVHRALPPVHNP
HIDLVPPQGVKLTPRHYAYLKISEGCNNRCSFCIIPKLRGDLVSRPANDVLREAEKLVKA
GVKELLVISQDTSAYGVDLKYAESPWQDRSVRAKFFDLAKELGEFGAWVRLQYVYPYPHV
DEVIGLMTEGKVLPYLDIPFQHASPDVLRAMKRPAAQEKTLARIQKWREQCPELTLRSTF
IVGFPGETDADFAYLLDWLDEAGIDRLGCFKYEPVAGATSNAIGNAVPDEVKQERWNALM
ARQQKISARRLKRKVGTRQQVIIDEVGPTVAKGRSKADAPEIDGAVYLTSRRPLKVGEIV
TAKIERSDQYDLHGSVAGF
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagcgccccatatttcgttcgtcagtctcggctgccccaaggcgctggtcgat
tccgagcgcatcatcacccggctgcgcgcggagggctatgaactcgcgcgcaagcatgac
ggcgccgacatcgtgatcgtcaacacctgcggcttcctcgacagcgccaagcaggaatcg
ctcgccgcgatcggcgaggcgatggccgagaacggcaaggtcatcgtcaccggctgcatg
ggcgccgagccggagcagatcgagagcgcctatcccggcgtgctctcgatcacggggccg
cagcaatatgagagcgtgctggatgccgtgcaccgcgcgctgccgccggtgcacaatcca
cacatcgacctggtgccgccgcagggcgtcaagctgacgccgcggcactacgcctatctg
aagatttccgaaggctgcaacaaccgttgcagtttctgcatcatcccgaagctgcgcggc
gatctggtgtcgcggccggccaatgacgtgctgcgcgaggccgagaagctggtgaaggcc
ggcgtcaaggaattgctggtgatctcgcaggacacctcggcctatggcgtcgacctgaaa
tacgccgagagcccctggcaggatcgcagcgtccgcgccaaattcttcgatctcgccaag
gagctcggcgagttcggcgcctgggtgcggctgcaatatgtctacccctacccgcatgtc
gacgaggtcatcggcctgatgaccgagggcaaggtgctgccctatctcgacatcccgttc
cagcatgcgagcccggacgtgctgcgcgcgatgaagcgcccggccgcgcaggagaagacg
ctggcgcggattcagaaatggcgcgagcagtgccccgagctgacgctgcgctcgaccttc
atcgtcggcttccccggcgagaccgatgccgatttcgcctatctgctcgactggctcgat
gaggccgggatcgaccgcctcggctgcttcaaatacgagccggtggccggtgccacgtcg
aacgcgatcggcaatgccgtgcccgacgaggtcaagcaggagcgctggaatgcgctgatg
gcgcggcagcagaagatttcggcgaggcgcctgaagcgcaaggtcggcacccgccagcag
gtgatcatcgacgaggtcggcccgacggttgcaaaaggccggtccaaggccgacgcgcca
gagatcgacggcgccgtctatctcaccagccgccgcccgctgaaagtgggcgagatcgtc
accgcgaagatcgagcgctccgaccaatacgacctgcacggcagcgtcgcgggattctag
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