Bradyrhizobium septentrionale: HAP48_0041900
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Entry
HAP48_0041900 CDS
T07866
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bsep
Bradyrhizobium septentrionale
Brite
KEGG Orthology (KO) [BR:
bsep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsep03032
]
HAP48_0041900 (topA)
03400 DNA repair and recombination proteins [BR:
bsep03400
]
HAP48_0041900 (topA)
Enzymes [BR:
bsep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HAP48_0041900 (topA)
DNA replication proteins [BR:
bsep03032
]
Prokaryotic type
DNA Topoisomerases
HAP48_0041900 (topA)
DNA repair and recombination proteins [BR:
bsep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HAP48_0041900 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Milton
Motif
Other DBs
NCBI-ProteinID:
UGY15013
LinkDB
All DBs
Position
8384484..8387243
Genome browser
AA seq
919 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGSSYEVLASFGHVRDLPAKNGSVDPDANFQMIWEVDAKAAG
RLNDIAKALKGADRLILATDPDREGEAISWHVLEVMKEKRALKDQKVERVVFNAITKQAV
TDAMRAPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFVPREYWSLVATLLTPRGDAFEARLVGADGKKIARLDIGSGAEAEDLKKAIEAA
LFKVATVEAKPARRNPQAPFTTSTLQQEASRKLGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIDPSAITQARKVIGEDYGNAYVPDAPRQYQAKAKNAQEAHEAIRPTDLSR
RPATIGRRLDTDQAKLYELIWKRTIASQMESAELERTTVDIEAKAGARTLELRASGQVIK
FDGFLALYQESRDDEEDEDSRRLPAMSAGEAVKRQSLAVTQHFTEPPPRFSEASLVKRME
ELGIGRPSTYASILQVLKDRGYVKLEKKRLHGEDKGRVVVAFLENFFSRYVEYDFTADLE
EQLDRVSNNEISWQQVLKDFWSGFIGAVNDIKDLRVAEVLDALDEMLGPHIYPPRADGGD
VRQCPTCGTGRLNLKAGKFGAFVGCSNYPECRYTRPLAADSAESADRVLGTDPDTGFDVT
VKAGRFGPYIQLGEQKDYAEGEKPKRAGIPKGTSPADVDLELALKLLSLPREIGKHPETG
EPITAGLGRFGPFVKHEKTYASLEAGDEVFDIGLNRAVTLIAEKIAKGPSGRRFGADPGK
PLGDHPTLGAVALKNGRYGAYVAAGGVNATIPSDKTPDEVTLAEAIALIDERAAKGGGKA
KGKKAKAAKPAKAKAETADGDAEAKPAKKAASKKAAAKPKTDATSKARAPVASGAKTSPA
KSSAPAKAPAKKSAGKARG
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtcattgtggagtcgcctgccaaggccaagacgatcaacaaatatctggga
tcctcctacgaggtcctggcgtcgtttggccatgtccgcgacctcccggccaagaacggt
tcggtcgatccggacgccaatttccagatgatctgggaggtcgatgccaaggccgccggc
cgtctgaacgacatcgccaaggcgctcaagggtgccgaccgcctgattctcgcaaccgac
cctgatcgcgagggcgaggcgatttcctggcacgtgctggaggtgatgaaggagaagcgc
gcgctgaaggaccagaaggtcgagcgcgtggtgttcaacgccatcacgaagcaggccgtc
accgacgccatgagggcgccgcgccagatcgacggcgcgctggtcgacgcctatatggcg
cgccgtgcgctggactatctggtcggcttcaccctctcccccgtgctgtggcgcaagttg
cccggcgcccgctccgccggccgcgtgcagtcggtcgcgctgcggctggtctgcgaccgc
gagctcgagatcgagaagttcgtgccgagggagtactggtcgctggtcgcgacgctgctg
acgccgcgcggcgacgccttcgaggcgcggctggtcggcgccgacggcaagaagatcgcg
cggctcgacatcggctccggcgccgaagccgaggacctcaagaaggcgatcgaggccgcg
ctgttcaaggttgcgaccgtcgaggccaaaccggcccggcgcaatccgcaggcccccttc
accacctcgaccctgcagcaggaagcgagccgcaagctcggcttcgcgccggcgcacacc
atgcgcatcgcgcagcggctgtatgaaggcatcgacatcggcggcgagaccactggtcta
atcacctatatgcgaaccgacggcgtccagatcgatccgtccgcgatcacccaggcccgc
aaggtgatcggcgaggactatggcaacgcctacgtgccggacgcgccgcgccagtaccag
gccaaggccaagaacgcgcaggaagcgcacgaagcgatccgcccgaccgatctttcgcgt
cgcccggccaccatcggccgccgcctcgataccgaccaggccaagctctatgagctgatc
tggaagcgcaccattgcgagccagatggagtcggccgaactcgagcgcaccaccgtcgac
atcgaagccaaggccggtgcccgcacactcgagctgcgcgcctccggccaggtcatcaag
ttcgacggcttcctcgcgctctatcaggaaagccgtgacgacgaggaagacgaggattcg
cgtcgcctgcccgcgatgagcgcgggcgaagcggtgaagcgccagagcctcgcggtcacc
cagcatttcactgagccgccgccgcgcttctcggaagcctcgctggtgaagcggatggaa
gagctcggcatcggccggccctcgacctacgcctcgatcctgcaggtcctgaaggaccgc
ggctacgtcaagctggagaagaagcggctacacggcgaggacaagggccgcgtcgtggtc
gcgttcctggaaaacttcttctcgcgatacgtcgaatacgacttcacggccgatctcgag
gaacagctcgatcgcgtctccaacaacgagatttcctggcagcaggtgctgaaggatttc
tggagcggcttcatcggcgcggtgaacgacatcaaggatctgcgcgtcgccgaggtgctc
gatgcgctcgacgagatgctgggcccgcatatctatccgccgcgcgcggatggcggcgac
gtcaggcagtgtccgacctgcggcaccgggcggctcaatctgaaggccggcaagttcggc
gccttcgtcggctgctcgaactatccggaatgccgctacacaaggccgctggcggccgac
agcgccgagagcgccgaccgcgtgctcggcaccgatcccgacaccgggttcgatgtcacg
gtgaaggccggccgtttcggcccctacatccagcttggcgagcagaaggattacgccgaa
ggcgagaagccgaagcgcgcggggattccgaagggcacctcgcctgccgatgtcgacctc
gaactggcgctcaagcttctgtcgctgccgcgcgagatcggcaaacatccggagaccggc
gagccgatcaccgccggcctcggccggttcgggccgttcgtcaagcacgagaagacctat
gccagcctcgaagccggcgacgaggtgttcgatatcgggttgaaccgcgccgtcacgctg
atcgcggagaagattgccaagggtccgagcggccgccgcttcggcgccgacccgggcaag
ccgctcggcgatcacccgacgctgggcgcggtcgcgctcaagaacggccgttacggcgcc
tatgtcgcggccggcggcgtcaacgcgacgatcccgagcgacaagacgcccgatgaggtc
acgcttgcggaagcgatcgcgctgatcgacgagcgcgcggccaagggcggcggcaaggca
aagggcaagaaggcgaaggcggcaaagcccgcaaaagccaaggccgaaacggccgacggc
gatgccgaggcgaagcccgccaagaaggcggcgtccaagaaggccgcggcgaaaccgaaa
acggatgcaaccagcaaggcgcgcgcgccggtcgcctcgggtgccaagacgtcgcctgca
aagtcatcggcaccagcgaaagcgcccgcgaagaagagcgccggcaaggcacgaggataa
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