Bradyrhizobium septentrionale: HAP48_0045270
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Entry
HAP48_0045270 CDS
T07866
Name
(GenBank) amino acid decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
bsep
Bradyrhizobium septentrionale
Pathway
bsep00330
Arginine and proline metabolism
bsep00480
Glutathione metabolism
bsep01100
Metabolic pathways
bsep01110
Biosynthesis of secondary metabolites
bsep04148
Efferocytosis
Module
bsep_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
bsep00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
HAP48_0045270
09106 Metabolism of other amino acids
00480 Glutathione metabolism
HAP48_0045270
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
HAP48_0045270
Enzymes [BR:
bsep01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
HAP48_0045270
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UGY15648
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All DBs
Position
8997491..8999848
Genome browser
AA seq
785 aa
AA seq
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MDYFKRFNFLFAAPVFEADDLEGIRFNQIIAEIERSGFEVVRARKLEDAEIAVQTDAAIG
CMVVDWGKKGLEGKTAGLINLMRRRGLDFPIILLIRRKRFEDLPVEVLDFIDGYVFLSEE
TPPFIAKNLISRLKQYAENLKTPFFGALVDYAEEGNQLWTCPGHNGGVFYSRSPIGRVFV
EHLGEAVFRDDLDNSVLDLGDLLTHEGPALKAQKEAARIFGAEKTYFVLNGTSTSNKVAL
GSLVTDGDLVLFDRNNHKAAHHGALLIGGGIPVYVPTVRNAWGLIGPMRWDLLDEGSLRD
HIRKHPLVKDENAWKKERPFRVAVVEQCTYDGTIHSAEMILKRIGHLCDYILFDEAWAGF
MKFHPIYSGRFAMGLSDLGPEAPGIIATQSTHKQLASFSQASQIHIRDRHIKGQKRRVEH
RRFNESFMQHASTSPFYPIFASLDVGAQMMKGRSGEVLWDDTIRLGIELRKKIRAVKREF
EEKETRAERRWFFEPFVPDRVMIPDVARENGVHNVAWETISTDQLATNPSYWQLNPGEAW
HGFPELTEGFAMTDPNKLTLLTPGFDHATGAYADHGIPAPVVAQYLRENRIVAEKNDLNS
LLFLLTPGVEASKAGTLVSGLVAFKKLHDDNALVEDVIPEFFRRRPQRYTGVRLRDLCGD
MHRFFRDGGVSTLQAKQFLPEHLPEIAMSPREAAQYLIRNDVDYLPIDQIFGRIAATPFV
VYPPGIATIVPGERLSERSKPMIDYLKMFEASFNAFPGFEVEVQGIYKEIDDSGRVRFYT
YVVSE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggactatttcaaacgcttcaacttcctgttcgccgcgccggtgttcgaggccgacgac
ctcgagggcatccgcttcaaccagatcatcgccgagatcgagcgctccggcttcgaggtg
gtccgcgcccgcaagctggaagacgccgagattgcggtgcagaccgatgccgcgatcggc
tgcatggtggtcgactggggcaagaagggccttgaaggcaagaccgcggggctgatcaac
ctgatgcgccggcgcggcctcgacttcccgatcatcctgttgatccgccgcaagcggttc
gaggacctgccggtcgaggtgctcgatttcatcgacggctacgtgttcctgtccgaggaa
accccgcccttcatcgccaagaacctgatctccaggctcaagcagtatgccgagaacctg
aagacgccgttctttggcgccctggtcgactatgccgaggaaggcaaccagctctggacc
tgcccgggccataatggcggcgtgttctacagccgcagcccgatcggccgggtgttcgtc
gaacatctcggcgaagccgtgtttcgcgacgatctcgacaattccgtgctcgacctcggc
gacctgctcacccatgaggggccggcgctgaaggcgcagaaggaggcggcgcggattttt
ggcgccgagaagacctatttcgtgctcaacggcacctcgacctccaacaaggtcgcgctc
ggatcgctggtcaccgatggcgacctcgtgctgttcgaccgtaacaaccacaaggccgcg
catcacggcgcgcttttgatcggcggcggcatcccggtctatgtgcccaccgtgcgcaac
gcctggggcctgatcggcccgatgcgctgggacctgctcgacgagggcagcttgcgcgac
cacatccgcaagcacccgctggtcaaggacgagaacgcctggaagaaggaacgtccgttc
cgcgtcgccgtggtcgagcagtgcacctatgacggcaccatccactcggccgagatgatc
ctgaagcggatcggccatctctgcgactacatcctgttcgacgaggcctgggccggcttc
atgaaattccacccgatctattccgggcgcttcgcgatggggctgtccgatctcggcccc
gaggcgcccggcatcatcgccacccaatcgacccacaagcagctcgcgagcttctcgcaa
gcctcgcagatccacatccgcgaccgccacatcaagggccaaaagcgccgggtcgagcac
cgccgcttcaacgaaagcttcatgcagcacgcctcgacctcgccgttttaccccatcttc
gcctcgctcgacgtcggcgcgcagatgatgaaggggcgctccggtgaagtgctgtgggac
gatacgatccggctcggcatcgagctgcgcaagaagatccgtgccgtcaagcgcgagttc
gaggagaaggagacgcgcgcggagcggcgctggttcttcgaacctttcgtgcccgatcgc
gtcatgatccccgacgtcgcgcgcgagaacggcgtgcacaatgtcgcctgggagaccatc
tcgaccgatcagcttgcgaccaatccgtcctactggcagctcaaccctggcgaggcgtgg
cacggcttccccgagctgacggagggctttgccatgaccgatccgaacaagctcacattg
ctgacgcccggctttgaccatgccaccggtgcctatgccgaccacggcatccccgccccc
gtggtggcgcaatatctgcgcgagaaccgcatcgtcgccgagaagaatgacctcaactcg
ctgctcttcctgctgacgcccggcgtcgaggccagcaaggccggcacgctggtgtcgggg
ctcgtcgccttcaagaagctgcatgacgacaacgcgctcgtcgaggacgtcatccctgaa
ttcttccgtcgccgcccgcaacgctacaccggggtgcggttgcgcgacctctgcggagac
atgcaccgtttcttccgcgacgggggagtcagcacgctgcaggccaagcaattcctgccc
gaacatctccccgagatcgcgatgtcgccgcgcgaggcggcgcaatatctgatccgcaac
gacgtcgactatctgccgatcgaccagatcttcggccgcatcgccgcgacgccgttcgtg
gtctatccgcccggcattgccaccatcgtgcccggcgagcggctgtcggaacgcagcaag
ccgatgatcgattacctcaagatgttcgaggcgagcttcaacgcgtttccgggcttcgag
gtcgaggtgcagggcatctacaaggaaatcgacgattccggccgcgtccgcttctacacc
tatgtcgtgtccgaatag
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