Bradyrhizobium septentrionale: HAP48_0047540
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Entry
HAP48_0047540 CDS
T07866
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
bsep
Bradyrhizobium septentrionale
Pathway
bsep00521
Streptomycin biosynthesis
bsep00523
Polyketide sugar unit biosynthesis
bsep00525
Acarbose and validamycin biosynthesis
bsep00541
Biosynthesis of various nucleotide sugars
bsep01100
Metabolic pathways
bsep01110
Biosynthesis of secondary metabolites
bsep01250
Biosynthesis of nucleotide sugars
Module
bsep_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bsep00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HAP48_0047540 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HAP48_0047540 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HAP48_0047540 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HAP48_0047540 (rfbB)
00525 Acarbose and validamycin biosynthesis
HAP48_0047540 (rfbB)
Enzymes [BR:
bsep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HAP48_0047540 (rfbB)
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Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
UGY16059
LinkDB
All DBs
Position
complement(9467325..9468380)
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AA seq
351 aa
AA seq
DB search
MPSKATIFVTGGAGFIGSAVIRRLLNCTDASIVNVDKMTYASSLHSIPSELSSERYALSR
TDICDSPGLRSLFDHYRPQAVMHLAAESHVDRSIDAPSDFIQTNVVGTFTLLQESLRYWR
ALEPAERDAFRLVHVSTDEVFGTLGADGHFVETSPYAPNSPYSASKAASDHLVRAWYETY
ELPTLVTNCSNNYGPYQFPEKLIPHMIIRGLADEALPVYGDGQHIRDWLYVEDHAEALIR
VFQHGRVGETYNIGGRSERTNLEVVELLCTLLDEARGAEMGAHKRLISFVRDRPGHDRRY
AIDPSKIERELGWSPQESFEAGIRKTVYWYLNNKPWWEAILRRGYQAQRLG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtgcctagcaaagcaacgatctttgtcaccggaggagccggcttcatcggctctgccgtt
attcggcgtttgctgaattgcaccgacgcttcgatcgtcaatgtcgacaagatgacgtac
gcgtccagccttcactcgattccgtcggagctaagcagcgaacgctatgccctctcgaga
acggatatctgcgacagtccgggcttgcgcagtctgttcgatcactaccggcctcaggcc
gtgatgcatcttgctgcggaaagccatgtcgatcgctcgatcgacgcgcccagcgatttc
atccagaccaatgttgtcggcaccttcacgctgctgcaggagtcgctgcgttactggcgg
gccttggagcccgcggagcgcgacgcgttccggctcgttcatgtctcgacggacgaggtg
tttggcacgctgggtgcggatggccatttcgtggaaacaagcccgtatgcgccaaactca
ccttattctgccagcaaggccgcttccgatcatctcgtgcgtgcgtggtacgagacctac
gaattgccgaccctggtgacaaattgttccaacaactacggaccctatcaatttcccgag
aagctgatccctcacatgatcatcaggggattggccgatgaggcgctacctgtctacggt
gatggtcagcacatccgtgactggctgtatgtcgaggaccatgcggaggcgttgatccgc
gtttttcagcacgggagagtgggtgagacctacaatatcggcggcaggagcgaacgaacc
aatctcgaggtcgtggaactgctctgtacgttgctcgatgaggccaggggggccgagatg
ggcgcgcacaagcgcctgatctcgtttgtcagggatcgtcccggccacgatcgccgctac
gccatcgacccgtccaagatcgagcgagaactcggctggagcccgcaggagagctttgag
gccggtatcagaaagacggtatattggtaccttaataacaagccctggtgggaagcgatt
cttcggcgaggataccaggcccagcggttgggatag
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