Burkholderia semiarida: R0290_00340
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Entry
R0290_00340 CDS
T10421
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bser Burkholderia semiarida
Pathway
bser03410
Base excision repair
Brite
Enzymes [BR:
bser01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
R0290_00340
DNA repair and recombination proteins [BR:
bser03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R0290_00340
Prokaryotic type
R0290_00340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XCV60256
LinkDB
All DBs
Position
1:81836..82759
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AA seq
307 aa
AA seq
DB search
MATRKTSRAPQQASLFDDPVPETAQADIPSAAPEPPAARRKAAKKTAAPAPMPEPASAAA
APRPVAADVPHLAAQFDALPAVWRDVLKPFTDSDAYAPLCRFVDEERAAGKTVYPTDVFR
ALRLTSPDDVKVVILGQDPYHGDDRGTPQAHGLAFSVPPAVRTPPSLRNIFKEIAANFGH
DTPRHGCLDTWARQGVLLLNTVLTVERGAAASHAKRGWEQCTDTLIRELAGRHRGLVFML
WGAHAQAKRALFDANAHCVLEAPHPSPLSAHRGFLGCRHFALANDYLVEAGREPIDWRLP
DVAETLA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccgcaagacttcccgcgcgccgcaacaggcgtcgctgttcgacgatcccgtg
ccggaaacggcgcaggccgatattccgtccgcggcgcccgagccgcctgccgctcggcgc
aaagcagcgaagaaaaccgcagcacccgcgcccatgcccgagccggcctcggccgccgcg
gcgccgcgacccgtcgccgccgacgtaccgcatctcgccgcgcaattcgacgcgctgccg
gctgtctggcgcgacgtgctgaaaccgttcaccgacagcgacgcgtacgcgccgctgtgc
cgcttcgtcgatgaggagcgtgcggccggcaagacggtctacccgaccgacgtgttccgc
gcgctgcgcctgacgagcccggacgacgtgaaggtcgtgatcctcggccaggatccgtac
cacggcgacgatcgcggcacgccgcaggcgcacggcctcgcgttctcggtgccgccggcc
gtccgcacgccgccgtcgctgcgcaacatcttcaaggaaatcgccgcgaacttcggtcac
gacacgccgcggcacggctgcctcgacacgtgggcgcgccagggcgtgctgctgctcaac
accgtgctgacggtcgagcgcggcgcggccgcgagccatgcgaagcgcggctgggagcaa
tgcacggacacgctgatccgcgagctcgccggccgtcatcgcgggctcgtgttcatgctg
tggggcgcgcacgcgcaggccaagcgcgccctgttcgacgcgaacgcgcattgcgtgctc
gaggcgccgcatccgtcgccgctgtccgcgcatcgcggcttcctcggctgccgccatttc
gcgctcgcgaacgactatctggtcgaagcaggccgcgaaccgatcgactggcgcctgccg
gacgtggccgaaacgctcgcgtaa
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