KEGG   Burkholderia semiarida: R0290_00570
Entry
R0290_00570       CDS       T10421                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
bser  Burkholderia semiarida
Pathway
bser03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bser00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    R0290_00570 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bser02044]
    R0290_00570 (tssM)
Secretion system [BR:bser02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   R0290_00570 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF8000 DUF2207_C DUF4229
Other DBs
NCBI-ProteinID: XCV60302
LinkDB
Position
1:133311..137255
AA seq 1314 aa
MQRILNVLTHPRTLSIVGIVALAAILFIVADMLQLPLLWAAIAFAAVLALWLAVALWRRW
RVKRANRQLGQVLEEQAETGKIAAPAAAALAPDAKTADLDVLRTRLSDAVKTIKTSKIGQ
VSGGSALYELPWYIVIGNPAAGKSSAVLNSGLQFPFADKNSAVIHGIGGTRNCDWFFTTE
GILLDTAGRYSVHEEDRSEWLGFLGLLKRYRPKAPINGIIVTASIAELTGNRPEFAINLA
KNLRQRVQELTEKLEVFAPVYVMFTKADLITGFTEFFSSSDKHEYDRVWGATLPYEPDDK
RDVVAQFDTHFEELYEGLKEISVAQLSLSRGNQLSPGQLSFPLEFSTIKPSLRAFLATLF
ENNPFQYKPIFRGFYFTSALQEGETNSAAAQRIAHRFGLDASALPKPHSAFSKNGFFLRD
LFSKVIFADRQTVRQFASPTKTRLRYATFFGFVAALALALGGWTWSTIGNQQLVANVQAD
LDNVTRLQQGRNDLQSRLQAMDILEDRIEQLEQFRRDKPLSVSLGLYQGDRLEQHLLTEY
YGGVRQILLAPVSQNLASFMKDVNAHPEQLVPMTRPPESGAVQGGTMPVSTNAAGAAPQA
GAALAASGTAPAAAPQQAAAPQGGLYSDASPTNVQDAYNALKTYLMLSDKRHVEQAHLTD
QLARFWRGWLETNRGNMPRDEMIRSAERMISFYLSRVNDNDWPMIDANLALVDQTRENLR
RVVRGMPARQRVYEEIKARASTRFAPMTIARIVGDGNQGLVAGSYAIPGTFTREAWFDYV
QPAIRDAATKELQAKDWVLNTSTQDDLTLEGSPEQIQKTLVGMYKTEYAQHWQKFMQGIA
VQGFTSFGQAVDGMNRLGDPQDSPIRKILETAYDQTSWDNPSLANVAIKKAQTGVVNWVK
QLFTRSQAGQMAAANIDINGNPAEVPMGPIGQEFVGLARIVATHDGTSMLKGYMESLSKV
RTRFNVIKNQGDPGPGARQLMQQTLDGSGSELADSLKLVDEQMLTGLTDSQRKSLRPLLV
RPLMQAFAVVIQPASAEVNKVWNAQVYQPFQNSLATKYPFAANAKVEAGAGEIAQVFGPD
GSIAKFVGTTLGPLAVRRGDTLAARTWGDMGIGLTPDFTNGFARWVAPLAGGAAGSAAAS
SEPQTVFQILPQPSTGTTEYTIAIDGQQLRYRNTPPQWTNFVWPNPQGSPGATLSATTFD
GRTVQLVNEPGRYGLEKLINSAQRKRRPDGTFDLTWAQGSVNVSVTMRIISTSQPSTGSG
DQPQQQSLRGLQLPSSVADASAGAAQNATQAGTGTPGAAPAVAAANATNAQRAQ
NT seq 3945 nt   +upstreamnt  +downstreamnt
atgcaacgcatcctcaacgtgctgactcatccgcgtacgctctcgatcgtcgggatcgtc
gcgctagcggccatcctgttcatcgtcgccgacatgctgcagttgccgctcctgtgggcg
gcaatcgcgttcgcggcggttctcgcgctgtggctcgccgtcgcgctgtggcgccgctgg
cgcgtgaagcgcgcgaaccggcagctgggccaggtgctggaagagcaggcggaaaccggc
aagatcgccgcgccggccgccgccgcgctcgcgcccgacgcgaagacggccgacctcgac
gtgctgcgcacgcgcctgtcggatgcggtgaagacgatcaagacgtcgaagatcggccag
gtctcgggcggctccgcgctgtacgagctgccgtggtacatcgtgatcggcaacccggcc
gcgggcaagagcagcgccgtgctcaattccggcctgcaattcccgttcgcggacaagaac
agcgccgtgatccacggcatcggcggcacgcgcaactgcgactggttcttcacgaccgaa
gggatcctgctcgacacggccggccgctattcggtgcacgaggaagaccgcagcgagtgg
ctcggcttcctcgggctgctcaagcgctaccgcccgaaggcgccgatcaacggcatcatc
gtcacggccagcatcgccgagctcaccggcaaccgccccgaattcgcgatcaacctcgcg
aagaatctccgccagcgcgttcaggagctgacggaaaagctggaagtgttcgcgccggtc
tacgtgatgttcacgaaggccgacctgatcaccggcttcaccgaattcttcagcagcagc
gacaaacacgagtacgaccgcgtgtggggcgccaccctgccctacgagcccgacgacaag
cgcgacgtcgtcgcgcagttcgacacgcacttcgaggaactctacgaagggctgaaggaa
atcagcgtcgcgcaactgtcgctgtcgcgcggcaaccagctgtcgccgggccagttgagc
ttcccgctcgaattctcgacgatcaagccgtcgctgcgcgcgttcctcgcgacgctgttc
gagaacaacccgttccagtacaagccgatcttccgcggcttctacttcaccagcgcgctg
caggaaggcgaaaccaacagcgcggccgcgcagcgcatcgcgcaccgcttcggcctcgac
gcgagcgcgctgccgaaaccgcacagcgcgttctcgaagaatggcttcttcctgcgcgac
ctgttctcgaaggtgatcttcgccgaccgccagacggtgcgccagttcgcgagcccgacc
aagacgcggctgcgctacgcgaccttcttcggcttcgtcgcggcgctcgcgctcgcgctg
gggggctggacctggtcgacgatcggcaaccagcagctcgtcgcgaacgtgcaggccgac
ctcgacaacgtcacgcgcctgcagcagggccgcaacgacctgcagtcgcgcctgcaggcg
atggacatcctcgaggaccggatcgagcagctcgaacagttccgccgcgacaagccgctg
tcggtgtcgctcggcctgtaccagggcgaccgtctggaacagcatctgctgaccgagtac
tacggcggcgtgcgccagatcctgctggcccccgtgtcgcagaacctcgcgtcgttcatg
aaggacgtgaacgcgcaccccgagcagctcgtgccgatgacgcgcccgcccgaatcgggc
gccgtgcagggcggtacgatgccggtctcgacgaacgcggcaggcgccgcgccgcaggcg
ggcgccgcgctggccgcgtccggcaccgcgccggccgccgccccgcaacaggcagccgcg
ccgcagggcggcctctacagcgacgcgtcgccgaccaacgtgcaggacgcgtacaacgcg
ctcaagacgtacctgatgctgtccgacaagcgccacgtcgaacaggcacacctgaccgac
cagctcgcccgcttctggcgcggctggctcgagacgaatcgcggcaacatgccgcgcgac
gagatgatccggagcgccgagcgcatgatctcgttctacctgtcgcgcgtgaacgacaac
gactggccgatgatcgacgcgaacctcgcgctcgtcgaccagacccgcgagaacctgcgc
cgcgtcgtgcgcggcatgccggcccgccagcgcgtgtacgaggaaatcaaggcgcgcgcg
tcgacccgcttcgcgccgatgaccatcgcgcgcatcgtcggcgacggcaaccagggtctc
gtggcaggcagctacgcgattccgggcacgttcacgcgcgaagcgtggttcgactacgtg
cagccggcgatccgcgatgcggcgaccaaggaactgcaggcgaaggattgggtgctcaac
acgtcgacgcaggacgacctgacgctcgagggcagccccgaacagatccagaagacgctc
gtcggcatgtacaagaccgagtacgcgcagcactggcagaagttcatgcagggcatcgcg
gtccagggcttcaccagcttcggccaggccgtcgacggcatgaaccgcctgggcgacccg
caggattcgccgatccgcaagatcctcgagaccgcgtacgaccagacgtcgtgggacaac
ccgtcgctcgcaaacgtcgcgatcaagaaggcgcagacgggcgtcgtgaactgggtcaag
caactgttcacgcgctcgcaggccggccagatggcggcggccaacatcgacatcaacggc
aatccggccgaggtgccgatgggcccgatcggccaggagttcgtcgggctcgcgcggatc
gtcgcgacgcatgacggcacgtcgatgctgaagggctacatggagtcgctgtcgaaggtc
cgcacgcgcttcaacgtgatcaagaaccagggtgacccggggccgggcgcgcgtcagctg
atgcagcaaacgctcgacggcagcggttcggaactcgccgattcgctgaagctcgtcgac
gagcagatgctgacgggcctgaccgattcgcaacgcaagtcgctgcgcccgctgctggtg
cggccgctgatgcaggcgttcgcggtcgtgatccagccggccagcgccgaagtcaacaag
gtgtggaacgcgcaggtctaccagccgttccagaactcgcttgcaacgaagtacccgttc
gcggcgaacgcgaaggtcgaggccggcgccggcgagatcgcgcaggtgttcggcccggac
ggctcgatcgcgaagttcgtcggcacgacgctcgggccgctcgcggtgcgccgcggcgac
acgctcgccgcccgcacgtggggcgacatgggcatcgggctcacgccggacttcacgaac
ggcttcgcacgctgggtcgcgccgctcgcgggcggcgccgccggcagcgcggccgcgtcg
tccgagccgcagaccgtgttccagatcctgccgcaaccgagcacgggcacgacggaatac
acgatcgcgatcgacggccagcaactgcgctaccgcaacacgccgccgcagtggaccaac
ttcgtgtggccgaacccgcagggctcgccgggcgcgacgctgtccgcgacgaccttcgac
ggccgcacggtgcagctcgtcaacgagccgggccgctacggtctcgagaagctgatcaac
tcggcacagcgcaagcgccgtccggacggcacgttcgacctgacgtgggcgcagggcagc
gtgaacgtgtcggtgacgatgcgcatcatcagcacgtcgcaaccgtcgaccggcagcggt
gaccagccgcagcagcagagcctgcgcggcctgcagctgccgtcgtcggtcgccgacgcg
agcgcgggcgccgcgcagaacgcgacgcaagccggcaccggcacgccgggcgccgcgccg
gccgtcgcggccgccaacgcaacgaatgcacagagggcgcaatga

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