Burkholderia semiarida: R0290_01060
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Entry
R0290_01060 CDS
T10421
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bser Burkholderia semiarida
Pathway
bser03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
R0290_01060 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bser03021
]
R0290_01060 (rpoA)
03400 DNA repair and recombination proteins [BR:
bser03400
]
R0290_01060 (rpoA)
Enzymes [BR:
bser01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
R0290_01060 (rpoA)
Transcription machinery [BR:
bser03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
R0290_01060 (rpoA)
DNA repair and recombination proteins [BR:
bser03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
R0290_01060 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
XCV60389
LinkDB
All DBs
Position
1:complement(244357..245334)
Genome browser
AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGENHARVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIELAHDCEV
INPNHVIAHLSKGGKLDVQIKIEKGRGYVPGNVRRYGEDTAKIIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETSGVITPEEAIRQSARILVDQLSVFAALEGTETAAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgctgaaacccaagatcatcgccgtggaatcgctgggcgagaaccac
gcgagggtggtcatggaaccgtttgaacgcggttacggccacaccttgggcaatgcgctt
cgccgcgtgctgctgtcgtcgatggtgggctacgcgccgaccgaagtcacgatcgcgggc
gtggtgcacgagtactcgacgctggatggcgtgcaggaagacgtcgtcaacctgctgctg
aacctgaagggcgtggtgttcaagctgcataaccgtgacgaagtgacggttacgctgcgc
aaggaaggcgaaggcgtcgtgacggccggcgatatcgagctggctcacgattgcgaagtc
atcaatccgaatcacgtgattgcgcacctgtcgaagggtggcaagctcgacgttcagatc
aagatcgaaaagggtcgcggctatgtgcccggcaacgtccgtcgctacggcgaagacacg
gccaagatcatcggccgcatcgtcctcgacgcatcgttctcgccggttcgccgcgtgagc
tacgctgtcgagagcgcacgtgtcgagcagcgtaccgacctcgacaagctcgtgatgaac
atcgagacgagcggcgtgatcacgccggaagaagcgatccgccagtcggcccgcatcctg
gtcgaccagttgtccgtgttcgcggcgctggaaggcacggaaacggcagccgaagcgccg
tcgcgtgcaccgcagatcgatccgatcctgctgcgtccggtggacgatctcgagctgacg
gttcgttcggcgaactgcctgaaggccgagaacatctactacatcggcgatctgatccag
cgcacggaaaacgagctgctgaagacgccgaacctcggtcgcaagtcgctcaacgagatc
aaggaagtgctcgcttcgcgcggtctcacgctgggcatgaagctcgagaactggccgccg
gctggtctcgacaagtaa
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