Burkholderia semiarida: R0290_01220
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Entry
R0290_01220 CDS
T10421
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bser Burkholderia semiarida
Pathway
bser03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bser00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R0290_01220 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bser03019
]
R0290_01220 (recQ)
03400 DNA repair and recombination proteins [BR:
bser03400
]
R0290_01220 (recQ)
Enzymes [BR:
bser01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R0290_01220 (recQ)
Messenger RNA biogenesis [BR:
bser03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R0290_01220 (recQ)
DNA repair and recombination proteins [BR:
bser03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
R0290_01220 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
SaeA_1st
Motif
Other DBs
NCBI-ProteinID:
XCV60419
LinkDB
All DBs
Position
1:complement(263449..265296)
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AA seq
615 aa
AA seq
DB search
MSRALEILDEVFGYSAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPALLRREAGQ
GAGIVVSPLIALMQDQVAALSEVGVRAAYLNSTLSGAEAAATERALREGEIDLLYVAPER
LMTGRFLDLLERAKIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPSVPRIALTATAD
AITRDEIIHRLALDDARVFVSSFDRPNIRYRIVEKDNARSQLLDFIRAEHTNADGTTDAG
VVYCLSRRKVEETAEWLKAQGVRALPYHAGMEFEVRQKHQEMFQREEGIVMCATIAFGMG
IDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMAYGLGDVVQQRKMIDESDADD
AHKRVQTSKLDALLGLCETISCRRVRLLNYFGEASQPCGNCDTCQEPPDSWDATREAQMA
LSCVFRAQRASGFNFGASHLIEILRGGRTEKVLQRGHDQLSTFGIGASLSEPEWRAIFRQ
LVAYGYLAVDHGGFGALVLTEAAKPVLKNEEKVTLRRYVKPQRTRQSSSRSGTRVDPTAG
MGARERARWDALRAWRAETAKTDGVPAYVIFHDATLAEIARNAPETIDDLRHIPGMGVRK
LERFGDEIIDVVESA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcgccctcgaaatactcgacgaagtctttggttattccgcctttcgcggccag
cagggcgagatcgtcgagcacgtcgccggcggcggcgattgcctcgtgctgatgcccacg
ggcggcggcaagtcgctgtgctaccagatccccgcgctgctgcgccgcgaggccgggcag
ggcgccggcatcgtcgtgtcgccgctgatcgcgctgatgcaggaccaggtcgccgcgttg
agcgaagtcggtgtgcgcgcggcttacctgaattcgacactgtcgggcgccgaggcggca
gccaccgagcgcgcgctgcgcgaaggtgaaatcgacctgctgtacgtcgcgccggagcgg
ttgatgacggggcgcttcctcgacctgctcgagcgcgcgaagatcgggctgttcgcgatc
gacgaagcgcactgcgtgtcgcaatgggggcacgatttccgtccggaatacatccagctg
tcggtgctgcacgagcgcttcccgtcggtgccgcgcatcgcgctgaccgccacggccgac
gcgatcacgcgcgacgagatcatccatcggctcgcgctcgacgacgcacgcgtgttcgtg
tcgagcttcgaccgcccgaacatccgctaccggatcgtcgaaaaggacaacgcgcgctcg
caactgctcgacttcatccgcgccgaacacacgaatgccgacggcacgacggatgcgggc
gtcgtctactgcctgtcgcgccgcaaggtcgaggaaacggccgaatggctgaaggcgcag
ggcgtgcgcgcgctgccgtatcacgcggggatggagttcgaggtgcggcagaagcaccag
gaaatgttccagcgcgaggagggcatcgtgatgtgcgcgacgatcgcgttcggcatgggt
atcgacaagcccgacgtgcgcttcgttgcccacctcgatttgccgaagagcgtcgaaggc
tactatcaggagaccggccgcgcgggccgcgacgggatgcccgcgaacgcgtggatggcg
tatggcctcggcgacgtcgtccagcagcgcaagatgatcgacgagtcggatgcggacgac
gcgcacaagcgcgtgcagacgtcgaagctcgacgcgctgctcggattgtgcgagacgatc
tcgtgtcgccgcgtgcggctgctgaactacttcggcgaggcgagccagccgtgcggcaac
tgcgacacgtgccaggagccgcccgattcatgggacgcgacgcgcgaggcgcagatggcg
ctgtcgtgcgtgttccgcgcgcagcgcgcgagcggcttcaacttcggcgcgagccatctg
atcgagatcctgcgcggcggccgcaccgagaaggtgctgcagcgcggccatgaccagttg
agcacgttcggtatcggcgcgtcgctgtccgagcccgagtggcgcgcgattttccggcaa
ctggtcgcgtacggctacctggcggtcgaccatggcggcttcggcgcgctggtgctcacc
gaggccgcgaagccggtgctgaagaacgaggaaaaggtcacgctgcgccgctacgtgaag
ccgcagcgcacgcgccagtcgtcgagccgcagcggcacgcgggtcgacccgacggccggc
atgggcgcgcgtgagcgcgcacgctgggacgcgctgcgtgcgtggcgcgcggaaaccgcg
aagacggacggcgtgccggcctacgtgatcttccacgacgcgacgctcgccgaaatcgcg
cgcaacgcgccggagacgatcgacgacctgcgtcacattcccggcatgggcgtgcgcaag
ctcgagcgcttcggcgacgagatcatcgacgtcgtcgaatcggcttga
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